Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.45□□□□□ -0.1
COMMD9Q9P000 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.45□□□□□ -0.1
COMMD9Q9P000 MIR4497-201ENST00000583208 89 ntBASIC14.45□□□□□ -0.1
COMMD9Q9P000 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.45□□□□□ -0.1
COMMD9Q9P000 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.45□□□□□ -0.1
COMMD9Q9P000 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.45□□□□□ -0.1
COMMD9Q9P000 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.45□□□□□ -0.1
COMMD9Q9P000 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
COMMD9Q9P000 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
COMMD9Q9P000 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
COMMD9Q9P000 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COMMD9Q9P000 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
COMMD9Q9P000 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COMMD9Q9P000 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
COMMD9Q9P000 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.45□□□□□ -0.1
COMMD9Q9P000 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
COMMD9Q9P000 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
COMMD9Q9P000 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COMMD9Q9P000 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COMMD9Q9P000 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COMMD9Q9P000 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COMMD9Q9P000 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COMMD9Q9P000 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COMMD9Q9P000 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.45□□□□□ -0.1
COMMD9Q9P000 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
COMMD9Q9P000 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.44□□□□□ -0.1
COMMD9Q9P000 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
COMMD9Q9P000 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD9Q9P000 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD9Q9P000 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD9Q9P000 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD9Q9P000 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD9Q9P000 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.44□□□□□ -0.1
COMMD9Q9P000 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD9Q9P000 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD9Q9P000 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD9Q9P000 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.44□□□□□ -0.1
COMMD9Q9P000 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD9Q9P000 KRT8P9-201ENST00000558927 1449 ntBASIC14.44□□□□□ -0.1
COMMD9Q9P000 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD9Q9P000 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD9Q9P000 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD9Q9P000 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.44□□□□□ -0.1
COMMD9Q9P000 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD9Q9P000 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.44□□□□□ -0.1
COMMD9Q9P000 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD9Q9P000 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD9Q9P000 ECEL1P2-202ENST00000465689 757 ntBASIC14.44□□□□□ -0.1
COMMD9Q9P000 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.44□□□□□ -0.1
COMMD9Q9P000 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.44□□□□□ -0.1
COMMD9Q9P000 AC024563.2-201ENST00000603282 481 ntBASIC14.44□□□□□ -0.1
COMMD9Q9P000 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.44□□□□□ -0.1
COMMD9Q9P000 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD9Q9P000 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD9Q9P000 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD9Q9P000 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD9Q9P000 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD9Q9P000 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD9Q9P000 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.44□□□□□ -0.1
COMMD9Q9P000 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD9Q9P000 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD9Q9P000 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD9Q9P000 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
COMMD9Q9P000 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.44□□□□□ -0.1
COMMD9Q9P000 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD9Q9P000 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD9Q9P000 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD9Q9P000 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.44□□□□□ -0.1
COMMD9Q9P000 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD9Q9P000 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.44□□□□□ -0.1
COMMD9Q9P000 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COMMD9Q9P000 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
COMMD9Q9P000 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
COMMD9Q9P000 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
COMMD9Q9P000 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COMMD9Q9P000 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.43□□□□□ -0.1
COMMD9Q9P000 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COMMD9Q9P000 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COMMD9Q9P000 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COMMD9Q9P000 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
COMMD9Q9P000 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.43□□□□□ -0.1
COMMD9Q9P000 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
COMMD9Q9P000 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
COMMD9Q9P000 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COMMD9Q9P000 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
COMMD9Q9P000 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.43□□□□□ -0.1
COMMD9Q9P000 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COMMD9Q9P000 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.43□□□□□ -0.1
COMMD9Q9P000 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
COMMD9Q9P000 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COMMD9Q9P000 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COMMD9Q9P000 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
COMMD9Q9P000 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.43□□□□□ -0.1
COMMD9Q9P000 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.43□□□□□ -0.1
COMMD9Q9P000 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.43□□□□□ -0.1
COMMD9Q9P000 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.43□□□□□ -0.1
COMMD9Q9P000 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.43□□□□□ -0.1
COMMD9Q9P000 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.43□□□□□ -0.1
COMMD9Q9P000 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COMMD9Q9P000 AC099063.4-201ENST00000641099 1602 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms