Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 CYP2A7P1-201ENST00000595391 815 ntBASIC19.6■□□□□ 0.73
SH2D4AQ9H788 AP001059.3-201ENST00000619053 235 ntBASIC19.6■□□□□ 0.73
SH2D4AQ9H788 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 UXT-AS1-201ENST00000590504 1525 ntBASIC19.6■□□□□ 0.73
SH2D4AQ9H788 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SH2D4AQ9H788 AL645608.8-201ENST00000606034 2086 ntBASIC19.6■□□□□ 0.73
SH2D4AQ9H788 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SH2D4AQ9H788 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SH2D4AQ9H788 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SH2D4AQ9H788 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SH2D4AQ9H788 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SH2D4AQ9H788 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.59■□□□□ 0.73
SH2D4AQ9H788 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.59■□□□□ 0.73
SH2D4AQ9H788 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SH2D4AQ9H788 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SH2D4AQ9H788 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SH2D4AQ9H788 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.59■□□□□ 0.73
SH2D4AQ9H788 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.59■□□□□ 0.73
SH2D4AQ9H788 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.59■□□□□ 0.73
SH2D4AQ9H788 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SH2D4AQ9H788 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.59■□□□□ 0.73
SH2D4AQ9H788 AC084121.4-201ENST00000641598 221 ntBASIC19.59■□□□□ 0.73
SH2D4AQ9H788 AF228730.8-201ENST00000642140 221 ntBASIC19.59■□□□□ 0.73
SH2D4AQ9H788 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SH2D4AQ9H788 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SH2D4AQ9H788 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SH2D4AQ9H788 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SH2D4AQ9H788 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.59■□□□□ 0.73
SH2D4AQ9H788 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SH2D4AQ9H788 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.59■□□□□ 0.73
SH2D4AQ9H788 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SH2D4AQ9H788 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SH2D4AQ9H788 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SH2D4AQ9H788 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SH2D4AQ9H788 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
SH2D4AQ9H788 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SH2D4AQ9H788 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
SH2D4AQ9H788 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
SH2D4AQ9H788 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SH2D4AQ9H788 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.58■□□□□ 0.73
SH2D4AQ9H788 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SH2D4AQ9H788 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
SH2D4AQ9H788 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
SH2D4AQ9H788 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
SH2D4AQ9H788 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SH2D4AQ9H788 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SH2D4AQ9H788 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SH2D4AQ9H788 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SH2D4AQ9H788 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.58■□□□□ 0.72
SH2D4AQ9H788 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SH2D4AQ9H788 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.58■□□□□ 0.72
SH2D4AQ9H788 LINC01225-203ENST00000563550 1244 ntBASIC19.58■□□□□ 0.72
SH2D4AQ9H788 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SH2D4AQ9H788 AC008267.7-201ENST00000624570 1194 ntBASIC19.58■□□□□ 0.72
SH2D4AQ9H788 Z92544.3-201ENST00000624747 417 ntBASIC19.58■□□□□ 0.72
SH2D4AQ9H788 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.58■□□□□ 0.72
SH2D4AQ9H788 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SH2D4AQ9H788 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
SH2D4AQ9H788 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.58■□□□□ 0.72
SH2D4AQ9H788 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
SH2D4AQ9H788 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SH2D4AQ9H788 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
SH2D4AQ9H788 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.58■□□□□ 0.72
SH2D4AQ9H788 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.57■□□□□ 0.72
SH2D4AQ9H788 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SH2D4AQ9H788 PRORSD1P-202ENST00000563365 2154 ntBASIC19.57■□□□□ 0.72
SH2D4AQ9H788 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SH2D4AQ9H788 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SH2D4AQ9H788 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.57■□□□□ 0.72
SH2D4AQ9H788 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SH2D4AQ9H788 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SH2D4AQ9H788 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SH2D4AQ9H788 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SH2D4AQ9H788 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.57■□□□□ 0.72
SH2D4AQ9H788 FAM58DP-201ENST00000428076 619 ntBASIC19.57■□□□□ 0.72
SH2D4AQ9H788 RBPMS2P1-201ENST00000437762 623 ntBASIC19.57■□□□□ 0.72
SH2D4AQ9H788 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.57■□□□□ 0.72
SH2D4AQ9H788 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.57■□□□□ 0.72
SH2D4AQ9H788 MIR4492-201ENST00000581627 80 ntBASIC19.57■□□□□ 0.72
SH2D4AQ9H788 MIR3197-201ENST00000582241 73 ntBASIC19.57■□□□□ 0.72
SH2D4AQ9H788 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SH2D4AQ9H788 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms