Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 SDHAP3-202ENST00000515467 728 ntBASIC22■■□□□ 1.11
ABCA3Q99758 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC22■■□□□ 1.11
ABCA3Q99758 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC22■■□□□ 1.11
ABCA3Q99758 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC22■■□□□ 1.11
ABCA3Q99758 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC22■■□□□ 1.11
ABCA3Q99758 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ABCA3Q99758 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ABCA3Q99758 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC22■■□□□ 1.11
ABCA3Q99758 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC22■■□□□ 1.11
ABCA3Q99758 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ABCA3Q99758 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
ABCA3Q99758 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
ABCA3Q99758 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC22■■□□□ 1.11
ABCA3Q99758 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC22■■□□□ 1.11
ABCA3Q99758 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC22■■□□□ 1.11
ABCA3Q99758 MEP1AP4-201ENST00000423244 1087 ntBASIC22■■□□□ 1.11
ABCA3Q99758 USB1-202ENST00000423271 1217 ntTSL 2 BASIC22■■□□□ 1.11
ABCA3Q99758 AL162726.2-201ENST00000438986 1017 ntBASIC22■■□□□ 1.11
ABCA3Q99758 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC22■■□□□ 1.11
ABCA3Q99758 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC22■■□□□ 1.11
ABCA3Q99758 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC22■■□□□ 1.11
ABCA3Q99758 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC22■■□□□ 1.11
ABCA3Q99758 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC22■■□□□ 1.11
ABCA3Q99758 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC22■■□□□ 1.11
ABCA3Q99758 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC22■■□□□ 1.11
ABCA3Q99758 MIR6869-201ENST00000619434 62 ntBASIC22■■□□□ 1.11
ABCA3Q99758 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC22■■□□□ 1.11
ABCA3Q99758 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ABCA3Q99758 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC21.99■■□□□ 1.11
ABCA3Q99758 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.99■■□□□ 1.11
ABCA3Q99758 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ABCA3Q99758 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ABCA3Q99758 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ABCA3Q99758 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
ABCA3Q99758 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC21.99■■□□□ 1.11
ABCA3Q99758 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ABCA3Q99758 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.99■■□□□ 1.11
ABCA3Q99758 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ABCA3Q99758 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC21.99■■□□□ 1.11
ABCA3Q99758 ACTBP11-201ENST00000436287 1126 ntBASIC21.99■■□□□ 1.11
ABCA3Q99758 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC21.99■■□□□ 1.11
ABCA3Q99758 FADS2-205ENST00000517839 469 ntTSL 3 BASIC21.99■■□□□ 1.11
ABCA3Q99758 AL583810.1-201ENST00000553344 1045 ntBASIC21.99■■□□□ 1.11
ABCA3Q99758 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC21.99■■□□□ 1.11
ABCA3Q99758 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ABCA3Q99758 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ABCA3Q99758 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.99■■□□□ 1.11
ABCA3Q99758 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
ABCA3Q99758 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.98■■□□□ 1.11
ABCA3Q99758 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
ABCA3Q99758 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
ABCA3Q99758 CDC14C-201ENST00000428251 1719 ntBASIC21.98■■□□□ 1.11
ABCA3Q99758 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
ABCA3Q99758 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ABCA3Q99758 MPV17-206ENST00000402722 827 ntTSL 3 BASIC21.98■■□□□ 1.11
ABCA3Q99758 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC21.98■■□□□ 1.11
ABCA3Q99758 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC21.98■■□□□ 1.11
ABCA3Q99758 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC21.98■■□□□ 1.11
ABCA3Q99758 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC21.98■■□□□ 1.11
ABCA3Q99758 RIT1-205ENST00000539040 919 ntTSL 2 BASIC21.98■■□□□ 1.11
ABCA3Q99758 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC21.98■■□□□ 1.11
ABCA3Q99758 LINC01115-203ENST00000606068 577 ntBASIC21.98■■□□□ 1.11
ABCA3Q99758 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
ABCA3Q99758 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ABCA3Q99758 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC21.98■■□□□ 1.11
ABCA3Q99758 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
ABCA3Q99758 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
ABCA3Q99758 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
ABCA3Q99758 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ABCA3Q99758 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
ABCA3Q99758 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.98■■□□□ 1.11
ABCA3Q99758 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ABCA3Q99758 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
ABCA3Q99758 STX1A-203ENST00000395155 783 ntTSL 2 BASIC21.97■■□□□ 1.11
ABCA3Q99758 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ABCA3Q99758 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC21.97■■□□□ 1.11
ABCA3Q99758 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
ABCA3Q99758 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC21.97■■□□□ 1.11
ABCA3Q99758 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC21.97■■□□□ 1.11
ABCA3Q99758 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC21.97■■□□□ 1.11
ABCA3Q99758 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC21.97■■□□□ 1.11
ABCA3Q99758 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC21.97■■□□□ 1.11
ABCA3Q99758 PFAS-212ENST00000625942 396 ntTSL 5 BASIC21.97■■□□□ 1.11
ABCA3Q99758 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ABCA3Q99758 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ABCA3Q99758 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
ABCA3Q99758 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
ABCA3Q99758 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
ABCA3Q99758 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ABCA3Q99758 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ABCA3Q99758 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ABCA3Q99758 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
ABCA3Q99758 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC21.97■■□□□ 1.11
ABCA3Q99758 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ABCA3Q99758 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ABCA3Q99758 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
ABCA3Q99758 APOC3-202ENST00000375345 604 ntTSL 5 BASIC21.97■■□□□ 1.11
ABCA3Q99758 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC21.97■■□□□ 1.11
ABCA3Q99758 DERL2-202ENST00000570848 657 ntTSL 5 BASIC21.97■■□□□ 1.11
ABCA3Q99758 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms