Protein–RNA interactions for Protein: Q8N6N3

C1orf52, UPF0690 protein C1orf52, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf52Q8N6N3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 AC087163.2-201ENST00000457299 853 ntBASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 AC006557.2-201ENST00000592985 1240 ntBASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 AC107918.4-202ENST00000641623 219 ntBASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
C1orf52Q8N6N3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 TOP3BP1-201ENST00000420768 1380 ntBASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 RPS2P1-201ENST00000434010 821 ntBASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
C1orf52Q8N6N3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
C1orf52Q8N6N3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.18
C1orf52Q8N6N3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
C1orf52Q8N6N3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
C1orf52Q8N6N3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
C1orf52Q8N6N3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C1orf52Q8N6N3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
C1orf52Q8N6N3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
C1orf52Q8N6N3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
C1orf52Q8N6N3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.14■□□□□ 0.17
C1orf52Q8N6N3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C1orf52Q8N6N3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
C1orf52Q8N6N3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C1orf52Q8N6N3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.14■□□□□ 0.17
C1orf52Q8N6N3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
C1orf52Q8N6N3 EMBP1-201ENST00000458200 901 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms