Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST2H2AA3Q6FI13 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HIST2H2AA3Q6FI13 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.33■□□□□ 0.2
HIST2H2AA3Q6FI13 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.33■□□□□ 0.2
HIST2H2AA3Q6FI13 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST2H2AA3Q6FI13 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST2H2AA3Q6FI13 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST2H2AA3Q6FI13 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST2H2AA3Q6FI13 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
HIST2H2AA3Q6FI13 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HIST2H2AA3Q6FI13 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HIST2H2AA3Q6FI13 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST2H2AA3Q6FI13 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST2H2AA3Q6FI13 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST2H2AA3Q6FI13 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HIST2H2AA3Q6FI13 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 ELK2BP-201ENST00000415014 1224 ntBASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 RPS15P9-201ENST00000494093 319 ntBASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 DUX4L17-201ENST00000557360 1267 ntBASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H2AA3Q6FI13 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 AL391256.1-201ENST00000443260 1855 ntBASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 TOP3BP1-201ENST00000420768 1380 ntBASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 KRT18P27-201ENST00000427733 1299 ntBASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 TP73-AS1-207ENST00000624167 988 ntBASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 AC005593.1-201ENST00000624894 515 ntBASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2AA3Q6FI13 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H2AA3Q6FI13 AGGF1P2-201ENST00000426656 2106 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms