Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 TUBB7P-202ENST00000428444 1305 ntBASIC15.94■□□□□ 0.14
LPCAT4Q643R3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.94■□□□□ 0.14
LPCAT4Q643R3 TUBB8P7-204ENST00000567960 1332 ntBASIC15.94■□□□□ 0.14
LPCAT4Q643R3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 AC010460.3-201ENST00000511359 1579 ntBASIC15.93■□□□□ 0.14
LPCAT4Q643R3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.93■□□□□ 0.14
LPCAT4Q643R3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 AC109462.3-201ENST00000573934 613 ntBASIC15.93■□□□□ 0.14
LPCAT4Q643R3 AP005242.2-201ENST00000580065 1175 ntBASIC15.93■□□□□ 0.14
LPCAT4Q643R3 AC019129.2-201ENST00000609837 1235 ntBASIC15.93■□□□□ 0.14
LPCAT4Q643R3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 AC023157.3-201ENST00000619086 2088 ntBASIC15.93■□□□□ 0.14
LPCAT4Q643R3 AC092338.2-201ENST00000568827 1415 ntBASIC15.93■□□□□ 0.14
LPCAT4Q643R3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LPCAT4Q643R3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 COX5BP2-201ENST00000392354 334 ntBASIC15.92■□□□□ 0.14
LPCAT4Q643R3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 HLA-J-202ENST00000469281 1241 ntBASIC15.92■□□□□ 0.14
LPCAT4Q643R3 RPPH1-201ENST00000516869 333 ntBASIC15.92■□□□□ 0.14
LPCAT4Q643R3 IGHV3-52-201ENST00000519770 353 ntBASIC15.92■□□□□ 0.14
LPCAT4Q643R3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 BX088651.1-201ENST00000540551 451 ntBASIC15.92■□□□□ 0.14
LPCAT4Q643R3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 AC024563.2-201ENST00000603282 481 ntBASIC15.92■□□□□ 0.14
LPCAT4Q643R3 AC004263.2-201ENST00000617183 678 ntBASIC15.92■□□□□ 0.14
LPCAT4Q643R3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 AC092865.7-201ENST00000641832 219 ntBASIC15.92■□□□□ 0.14
LPCAT4Q643R3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.92■□□□□ 0.14
LPCAT4Q643R3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LPCAT4Q643R3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms