Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SRPXP78539 AL390719.2-201ENST00000606993 987 ntBASIC13.95□□□□□ -0.18
SRPXP78539 AL138966.2-201ENST00000621997 464 ntBASIC13.95□□□□□ -0.18
SRPXP78539 AC073912.3-201ENST00000624414 853 ntBASIC13.95□□□□□ -0.18
SRPXP78539 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SRPXP78539 AL139011.1-202ENST00000642063 584 ntBASIC13.95□□□□□ -0.18
SRPXP78539 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SRPXP78539 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SRPXP78539 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SRPXP78539 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SRPXP78539 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SRPXP78539 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SRPXP78539 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SRPXP78539 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SRPXP78539 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.95□□□□□ -0.18
SRPXP78539 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SRPXP78539 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SRPXP78539 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SRPXP78539 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SRPXP78539 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SRPXP78539 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SRPXP78539 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.95□□□□□ -0.18
SRPXP78539 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SRPXP78539 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SRPXP78539 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.94□□□□□ -0.18
SRPXP78539 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.94□□□□□ -0.18
SRPXP78539 AC024909.3-201ENST00000611513 2257 ntBASIC13.94□□□□□ -0.18
SRPXP78539 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC13.94□□□□□ -0.18
SRPXP78539 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SRPXP78539 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.94□□□□□ -0.18
SRPXP78539 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.94□□□□□ -0.18
SRPXP78539 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SRPXP78539 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.94□□□□□ -0.18
SRPXP78539 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.94□□□□□ -0.18
SRPXP78539 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.94□□□□□ -0.18
SRPXP78539 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
SRPXP78539 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SRPXP78539 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
SRPXP78539 AC125634.1-201ENST00000438758 1403 ntBASIC13.94□□□□□ -0.18
SRPXP78539 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC13.94□□□□□ -0.18
SRPXP78539 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.94□□□□□ -0.18
SRPXP78539 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.94□□□□□ -0.18
SRPXP78539 AC005332.3-201ENST00000589904 676 ntBASIC13.94□□□□□ -0.18
SRPXP78539 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13.94□□□□□ -0.18
SRPXP78539 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SRPXP78539 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
SRPXP78539 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SRPXP78539 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SRPXP78539 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.94□□□□□ -0.18
SRPXP78539 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.94□□□□□ -0.18
SRPXP78539 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SRPXP78539 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SRPXP78539 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SRPXP78539 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SRPXP78539 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SRPXP78539 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SRPXP78539 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SRPXP78539 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SRPXP78539 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SRPXP78539 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SRPXP78539 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
SRPXP78539 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SRPXP78539 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SRPXP78539 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.93□□□□□ -0.18
SRPXP78539 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.93□□□□□ -0.18
SRPXP78539 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SRPXP78539 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SRPXP78539 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms