Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 LINC01711-201ENST00000598340 967 ntBASIC15.04■□□□□ -0
SRP9P49458 AC138894.3-201ENST00000603787 634 ntBASIC15.04■□□□□ -0
SRP9P49458 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRP9P49458 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
SRP9P49458 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.04■□□□□ -0
SRP9P49458 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRP9P49458 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
SRP9P49458 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
SRP9P49458 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
SRP9P49458 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.04■□□□□ -0
SRP9P49458 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.04■□□□□ -0
SRP9P49458 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.04■□□□□ -0
SRP9P49458 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRP9P49458 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRP9P49458 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SRP9P49458 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SRP9P49458 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SRP9P49458 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
SRP9P49458 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.04■□□□□ -0
SRP9P49458 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.04■□□□□ -0
SRP9P49458 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
SRP9P49458 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRP9P49458 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRP9P49458 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SRP9P49458 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SRP9P49458 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SRP9P49458 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.03■□□□□ -0
SRP9P49458 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SRP9P49458 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.03■□□□□ -0
SRP9P49458 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.03■□□□□ -0
SRP9P49458 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SRP9P49458 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SRP9P49458 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.03■□□□□ -0
SRP9P49458 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRP9P49458 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.03■□□□□ -0
SRP9P49458 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.03■□□□□ -0
SRP9P49458 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.03■□□□□ -0
SRP9P49458 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SRP9P49458 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRP9P49458 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.03■□□□□ -0
SRP9P49458 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRP9P49458 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.03■□□□□ -0
SRP9P49458 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRP9P49458 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SRP9P49458 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SRP9P49458 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.03■□□□□ -0
SRP9P49458 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.03■□□□□ -0
SRP9P49458 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.03■□□□□ -0
SRP9P49458 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.03■□□□□ -0
SRP9P49458 NUS1P2-201ENST00000417358 873 ntBASIC15.03■□□□□ -0
SRP9P49458 AC103564.2-201ENST00000432853 1299 ntBASIC15.03■□□□□ -0
SRP9P49458 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.03■□□□□ -0
SRP9P49458 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.03■□□□□ -0
SRP9P49458 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRP9P49458 AC122714.2-201ENST00000502787 707 ntBASIC15.03■□□□□ -0
SRP9P49458 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.03■□□□□ -0
SRP9P49458 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.03■□□□□ -0
SRP9P49458 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.03■□□□□ -0
SRP9P49458 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.03■□□□□ -0
SRP9P49458 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.03■□□□□ -0
SRP9P49458 BNIP3P18-201ENST00000593976 575 ntBASIC15.03■□□□□ -0
SRP9P49458 AC011467.2-201ENST00000598425 242 ntBASIC15.03■□□□□ -0
SRP9P49458 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRP9P49458 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.03■□□□□ -0
SRP9P49458 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.03■□□□□ -0
SRP9P49458 AC114341.1-201ENST00000618070 349 ntBASIC15.03■□□□□ -0
SRP9P49458 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.03■□□□□ -0
SRP9P49458 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.03■□□□□ -0
SRP9P49458 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.03■□□□□ -0
SRP9P49458 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SRP9P49458 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SRP9P49458 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.03■□□□□ -0
SRP9P49458 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.03■□□□□ -0
SRP9P49458 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.03■□□□□ -0
SRP9P49458 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SRP9P49458 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.03■□□□□ -0
SRP9P49458 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.02■□□□□ -0
SRP9P49458 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
SRP9P49458 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.02■□□□□ -0
SRP9P49458 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.02■□□□□ -0
SRP9P49458 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.02■□□□□ -0
SRP9P49458 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.02■□□□□ -0
SRP9P49458 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SRP9P49458 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
SRP9P49458 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SRP9P49458 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.02■□□□□ -0
SRP9P49458 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.02■□□□□ -0
SRP9P49458 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SRP9P49458 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
SRP9P49458 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.02■□□□□ -0
SRP9P49458 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SRP9P49458 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SRP9P49458 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.02■□□□□ -0
SRP9P49458 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SRP9P49458 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SRP9P49458 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
SRP9P49458 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SRP9P49458 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.02■□□□□ -0
SRP9P49458 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.02■□□□□ -0
SRP9P49458 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms