Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC175P0C221 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC175P0C221 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC175P0C221 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC175P0C221 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC175P0C221 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CCDC175P0C221 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC175P0C221 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC175P0C221 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC175P0C221 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC175P0C221 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CCDC175P0C221 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC175P0C221 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CCDC175P0C221 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC175P0C221 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC175P0C221 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC175P0C221 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC175P0C221 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC175P0C221 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC175P0C221 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC175P0C221 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC175P0C221 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC175P0C221 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CCDC175P0C221 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC175P0C221 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC175P0C221 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC175P0C221 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC175P0C221 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC175P0C221 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC175P0C221 KLF4P1-201ENST00000412782 1185 ntBASIC18.27■□□□□ 0.52
CCDC175P0C221 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC175P0C221 GUSBP12-201ENST00000513727 720 ntBASIC18.27■□□□□ 0.52
CCDC175P0C221 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
CCDC175P0C221 VENTXP5-201ENST00000523979 775 ntBASIC18.27■□□□□ 0.52
CCDC175P0C221 DUX4L17-201ENST00000557360 1267 ntBASIC18.27■□□□□ 0.52
CCDC175P0C221 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC175P0C221 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC175P0C221 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC175P0C221 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC175P0C221 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC175P0C221 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC175P0C221 AC132938.5-201ENST00000624980 1813 ntBASIC18.27■□□□□ 0.52
CCDC175P0C221 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC175P0C221 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC175P0C221 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC175P0C221 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.27■□□□□ 0.51
CCDC175P0C221 AL021920.2-201ENST00000624828 1351 ntBASIC18.27■□□□□ 0.51
CCDC175P0C221 AC092384.3-202ENST00000564646 2873 ntBASIC18.27■□□□□ 0.51
CCDC175P0C221 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC175P0C221 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC175P0C221 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC175P0C221 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC175P0C221 AL596087.1-201ENST00000400979 1969 ntBASIC18.26■□□□□ 0.51
CCDC175P0C221 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC175P0C221 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC175P0C221 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC175P0C221 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC175P0C221 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC175P0C221 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.26■□□□□ 0.51
CCDC175P0C221 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC175P0C221 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CCDC175P0C221 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC175P0C221 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC175P0C221 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CCDC175P0C221 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CCDC175P0C221 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC175P0C221 ATP5G1P1-201ENST00000448724 379 ntBASIC18.26■□□□□ 0.51
CCDC175P0C221 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC175P0C221 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC175P0C221 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC175P0C221 AC005336.2-201ENST00000593183 939 ntBASIC18.26■□□□□ 0.51
CCDC175P0C221 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC175P0C221 AC145285.6-201ENST00000604632 637 ntBASIC18.26■□□□□ 0.51
CCDC175P0C221 AL353801.3-201ENST00000609898 542 ntBASIC18.26■□□□□ 0.51
CCDC175P0C221 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC175P0C221 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC175P0C221 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC175P0C221 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC175P0C221 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC175P0C221 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC175P0C221 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC175P0C221 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC175P0C221 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC175P0C221 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC175P0C221 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC175P0C221 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC175P0C221 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC175P0C221 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC175P0C221 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC175P0C221 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC175P0C221 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC175P0C221 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC175P0C221 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC175P0C221 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC175P0C221 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC175P0C221 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC175P0C221 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC175P0C221 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC175P0C221 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC175P0C221 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms