Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSPG5O95196 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CSPG5O95196 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.12■□□□□ 0.49
CSPG5O95196 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.12■□□□□ 0.49
CSPG5O95196 SPDYE14P-201ENST00000442619 822 ntBASIC18.12■□□□□ 0.49
CSPG5O95196 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.12■□□□□ 0.49
CSPG5O95196 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.12■□□□□ 0.49
CSPG5O95196 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.12■□□□□ 0.49
CSPG5O95196 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.12■□□□□ 0.49
CSPG5O95196 AP005018.1-201ENST00000525475 301 ntBASIC18.12■□□□□ 0.49
CSPG5O95196 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSPG5O95196 AC008761.3-201ENST00000624803 892 ntBASIC18.12■□□□□ 0.49
CSPG5O95196 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CSPG5O95196 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSPG5O95196 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.12■□□□□ 0.49
CSPG5O95196 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CSPG5O95196 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.12■□□□□ 0.49
CSPG5O95196 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CSPG5O95196 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSPG5O95196 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSPG5O95196 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.12■□□□□ 0.49
CSPG5O95196 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.12■□□□□ 0.49
CSPG5O95196 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSPG5O95196 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSPG5O95196 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSPG5O95196 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSPG5O95196 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.12■□□□□ 0.49
CSPG5O95196 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSPG5O95196 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSPG5O95196 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSPG5O95196 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CSPG5O95196 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CSPG5O95196 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CSPG5O95196 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
CSPG5O95196 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSPG5O95196 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.11■□□□□ 0.49
CSPG5O95196 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.11■□□□□ 0.49
CSPG5O95196 HMGA1P7-201ENST00000406908 502 ntBASIC18.11■□□□□ 0.49
CSPG5O95196 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.11■□□□□ 0.49
CSPG5O95196 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.11■□□□□ 0.49
CSPG5O95196 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CSPG5O95196 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSPG5O95196 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.11■□□□□ 0.49
CSPG5O95196 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSPG5O95196 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CSPG5O95196 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.11■□□□□ 0.49
CSPG5O95196 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CSPG5O95196 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CSPG5O95196 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CSPG5O95196 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSPG5O95196 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSPG5O95196 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSPG5O95196 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSPG5O95196 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CSPG5O95196 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSPG5O95196 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.1■□□□□ 0.49
CSPG5O95196 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CSPG5O95196 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.1■□□□□ 0.49
CSPG5O95196 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.1■□□□□ 0.49
CSPG5O95196 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CSPG5O95196 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.1■□□□□ 0.49
CSPG5O95196 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CSPG5O95196 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSPG5O95196 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.1■□□□□ 0.49
CSPG5O95196 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.1■□□□□ 0.49
CSPG5O95196 MIR4515-201ENST00000584082 81 ntBASIC18.1■□□□□ 0.49
CSPG5O95196 AL139327.4-201ENST00000612362 153 ntBASIC18.1■□□□□ 0.49
CSPG5O95196 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CSPG5O95196 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSPG5O95196 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.1■□□□□ 0.49
CSPG5O95196 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSPG5O95196 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSPG5O95196 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSPG5O95196 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
CSPG5O95196 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.1■□□□□ 0.49
CSPG5O95196 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.1■□□□□ 0.49
CSPG5O95196 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CSPG5O95196 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CSPG5O95196 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CSPG5O95196 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CSPG5O95196 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.1■□□□□ 0.49
CSPG5O95196 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CSPG5O95196 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CSPG5O95196 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.09■□□□□ 0.49
CSPG5O95196 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSPG5O95196 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
CSPG5O95196 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSPG5O95196 KRT18P55-202ENST00000578578 1546 ntBASIC18.09■□□□□ 0.49
CSPG5O95196 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSPG5O95196 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSPG5O95196 AC012317.2-201ENST00000623305 2251 ntBASIC18.09■□□□□ 0.49
CSPG5O95196 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSPG5O95196 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CSPG5O95196 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CSPG5O95196 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CSPG5O95196 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CSPG5O95196 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.09■□□□□ 0.49
CSPG5O95196 AC140878.1-201ENST00000565277 250 ntBASIC18.09■□□□□ 0.49
CSPG5O95196 AL008721.1-201ENST00000609964 604 ntBASIC18.09■□□□□ 0.49
CSPG5O95196 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms