Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NDUFA1O15239 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
NDUFA1O15239 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NDUFA1O15239 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
NDUFA1O15239 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC11.6□□□□□ -0.55
NDUFA1O15239 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC11.6□□□□□ -0.55
NDUFA1O15239 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
NDUFA1O15239 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC11.59□□□□□ -0.55
NDUFA1O15239 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 VILL-207ENST00000465644 1857 ntTSL 5 BASIC11.59□□□□□ -0.55
NDUFA1O15239 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
NDUFA1O15239 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC11.59□□□□□ -0.55
NDUFA1O15239 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC11.59□□□□□ -0.55
NDUFA1O15239 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
NDUFA1O15239 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC11.59□□□□□ -0.55
NDUFA1O15239 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC11.59□□□□□ -0.55
NDUFA1O15239 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 SNX5-210ENST00000481323 562 ntTSL 3 BASIC11.59□□□□□ -0.55
NDUFA1O15239 IGHV3-52-201ENST00000519770 353 ntBASIC11.59□□□□□ -0.55
NDUFA1O15239 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC11.59□□□□□ -0.55
NDUFA1O15239 NAA38-203ENST00000575071 553 ntTSL 2 BASIC11.59□□□□□ -0.55
NDUFA1O15239 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC11.59□□□□□ -0.55
NDUFA1O15239 TMED1-207ENST00000591695 809 ntTSL 5 BASIC11.59□□□□□ -0.55
NDUFA1O15239 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 AC139887.4-201ENST00000607877 719 ntBASIC11.59□□□□□ -0.55
NDUFA1O15239 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC11.59□□□□□ -0.55
NDUFA1O15239 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC11.59□□□□□ -0.55
NDUFA1O15239 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC11.59□□□□□ -0.55
NDUFA1O15239 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
NDUFA1O15239 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
NDUFA1O15239 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
NDUFA1O15239 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
NDUFA1O15239 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
NDUFA1O15239 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC11.59□□□□□ -0.55
NDUFA1O15239 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NDUFA1O15239 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC11.58□□□□□ -0.55
NDUFA1O15239 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.55
NDUFA1O15239 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC11.58□□□□□ -0.55
NDUFA1O15239 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.55
NDUFA1O15239 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
NDUFA1O15239 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC11.58□□□□□ -0.55
NDUFA1O15239 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.55
NDUFA1O15239 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.55
NDUFA1O15239 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
NDUFA1O15239 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NDUFA1O15239 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
NDUFA1O15239 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC11.58□□□□□ -0.56
NDUFA1O15239 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NDUFA1O15239 AC092850.2-201ENST00000623821 2697 ntBASIC11.58□□□□□ -0.56
NDUFA1O15239 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NDUFA1O15239 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC11.58□□□□□ -0.56
NDUFA1O15239 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NDUFA1O15239 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
NDUFA1O15239 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
NDUFA1O15239 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NDUFA1O15239 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NDUFA1O15239 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NDUFA1O15239 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NDUFA1O15239 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC11.58□□□□□ -0.56
NDUFA1O15239 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
NDUFA1O15239 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
NDUFA1O15239 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
NDUFA1O15239 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC11.58□□□□□ -0.56
NDUFA1O15239 AL391256.1-201ENST00000443260 1855 ntBASIC11.58□□□□□ -0.56
NDUFA1O15239 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NDUFA1O15239 BAALC-202ENST00000306391 243 ntTSL 5 BASIC11.58□□□□□ -0.56
NDUFA1O15239 TERF1P1-201ENST00000311003 1181 ntBASIC11.58□□□□□ -0.56
NDUFA1O15239 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
NDUFA1O15239 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NDUFA1O15239 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NDUFA1O15239 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NDUFA1O15239 BAALC-204ENST00000330955 222 ntTSL 5 BASIC11.58□□□□□ -0.56
NDUFA1O15239 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms