Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDH17O14917 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDH17O14917 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDH17O14917 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH17O14917 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDH17O14917 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH17O14917 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDH17O14917 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDH17O14917 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDH17O14917 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PCDH17O14917 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PCDH17O14917 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
PCDH17O14917 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
PCDH17O14917 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
PCDH17O14917 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.14■□□□□ 0.18
PCDH17O14917 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PCDH17O14917 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDH17O14917 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH17O14917 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PCDH17O14917 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH17O14917 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH17O14917 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH17O14917 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PCDH17O14917 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PCDH17O14917 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH17O14917 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PCDH17O14917 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH17O14917 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH17O14917 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH17O14917 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH17O14917 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PCDH17O14917 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PCDH17O14917 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDH17O14917 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH17O14917 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH17O14917 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH17O14917 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH17O14917 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH17O14917 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH17O14917 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDH17O14917 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH17O14917 VN2R19P-201ENST00000442399 1052 ntBASIC16.14■□□□□ 0.17
PCDH17O14917 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
PCDH17O14917 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDH17O14917 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.14■□□□□ 0.17
PCDH17O14917 AC108073.2-201ENST00000464002 357 ntBASIC16.14■□□□□ 0.17
PCDH17O14917 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDH17O14917 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.14■□□□□ 0.17
PCDH17O14917 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH17O14917 AC002347.1-201ENST00000569543 541 ntBASIC16.14■□□□□ 0.17
PCDH17O14917 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDH17O14917 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDH17O14917 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH17O14917 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PCDH17O14917 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH17O14917 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH17O14917 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDH17O14917 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH17O14917 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH17O14917 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH17O14917 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDH17O14917 AL135999.2-201ENST00000622438 1686 ntBASIC16.14■□□□□ 0.17
PCDH17O14917 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDH17O14917 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDH17O14917 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDH17O14917 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH17O14917 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDH17O14917 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH17O14917 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH17O14917 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH17O14917 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH17O14917 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDH17O14917 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH17O14917 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH17O14917 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH17O14917 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH17O14917 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH17O14917 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH17O14917 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH17O14917 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH17O14917 PTCHD3P3-201ENST00000403073 906 ntBASIC16.13■□□□□ 0.17
PCDH17O14917 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH17O14917 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDH17O14917 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH17O14917 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.13■□□□□ 0.17
PCDH17O14917 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDH17O14917 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDH17O14917 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDH17O14917 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH17O14917 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDH17O14917 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PCDH17O14917 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDH17O14917 CROCCP1-201ENST00000426910 5675 ntBASIC16.13■□□□□ 0.17
PCDH17O14917 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH17O14917 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDH17O14917 AL590787.1-201ENST00000568856 1315 ntBASIC16.13■□□□□ 0.17
PCDH17O14917 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDH17O14917 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH17O14917 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH17O14917 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms