Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC011498.5-201ENST00000592027 486 ntBASIC17.57■□□□□ 0.4
CCDC188H7C350 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.57■□□□□ 0.4
CCDC188H7C350 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC188H7C350 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC188H7C350 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CCDC188H7C350 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC188H7C350 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC188H7C350 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC188H7C350 AL603832.2-201ENST00000566195 2125 ntBASIC17.57■□□□□ 0.4
CCDC188H7C350 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC188H7C350 AC148477.5-201ENST00000625164 1645 ntBASIC17.57■□□□□ 0.4
CCDC188H7C350 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC188H7C350 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC188H7C350 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CCDC188H7C350 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC188H7C350 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CCDC188H7C350 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC188H7C350 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC188H7C350 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC188H7C350 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC188H7C350 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC188H7C350 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC188H7C350 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC188H7C350 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC188H7C350 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC188H7C350 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC188H7C350 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC188H7C350 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC188H7C350 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC188H7C350 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC188H7C350 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC188H7C350 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC188H7C350 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC188H7C350 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC188H7C350 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.56■□□□□ 0.4
CCDC188H7C350 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC188H7C350 AC133561.5-201ENST00000635547 218 ntBASIC17.56■□□□□ 0.4
CCDC188H7C350 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC188H7C350 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC188H7C350 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC188H7C350 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC188H7C350 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
CCDC188H7C350 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC188H7C350 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC188H7C350 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC188H7C350 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC188H7C350 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC188H7C350 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC188H7C350 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC188H7C350 TP73-AS1-210ENST00000637775 1455 ntBASIC17.56■□□□□ 0.4
CCDC188H7C350 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC188H7C350 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC188H7C350 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.56■□□□□ 0.4
CCDC188H7C350 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC188H7C350 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC188H7C350 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC188H7C350 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC188H7C350 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CCDC188H7C350 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC188H7C350 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC188H7C350 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC188H7C350 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC188H7C350 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CCDC188H7C350 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCDC188H7C350 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC188H7C350 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC188H7C350 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC188H7C350 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC188H7C350 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC188H7C350 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC188H7C350 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCDC188H7C350 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC188H7C350 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC188H7C350 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC188H7C350 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC188H7C350 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC188H7C350 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC188H7C350 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC188H7C350 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC188H7C350 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC188H7C350 AL671277.2-201ENST00000458060 996 ntBASIC17.55■□□□□ 0.4
CCDC188H7C350 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC188H7C350 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC188H7C350 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC188H7C350 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC188H7C350 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC188H7C350 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC188H7C350 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC188H7C350 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC188H7C350 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC188H7C350 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC188H7C350 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC188H7C350 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC188H7C350 LINC00554-201ENST00000564841 3011 ntBASIC17.55■□□□□ 0.4
CCDC188H7C350 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC188H7C350 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC188H7C350 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC188H7C350 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC188H7C350 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC188H7C350 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms