Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 AC107890.1-201ENST00000422478 521 ntBASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 AC055876.3-201ENST00000431496 288 ntBASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 AC125807.1-201ENST00000483097 614 ntBASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 INGX-202ENST00000489074 768 ntBASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 AC138649.4-201ENST00000612222 287 ntBASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 AC084121.4-201ENST00000641598 221 ntBASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 AF228730.8-201ENST00000642140 221 ntBASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 BASP1P1-201ENST00000430708 665 ntBASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 AP000842.3-202ENST00000569238 1080 ntBASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 MIR4745-201ENST00000577608 62 ntBASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TBC1D3BA6NDS4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TBC1D3BA6NDS4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TBC1D3BA6NDS4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TBC1D3BA6NDS4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TBC1D3BA6NDS4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TBC1D3BA6NDS4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.05■□□□□ 0.32
TBC1D3BA6NDS4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TBC1D3BA6NDS4 LINC00896-202ENST00000609602 2128 ntBASIC17.05■□□□□ 0.32
TBC1D3BA6NDS4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.05■□□□□ 0.32
TBC1D3BA6NDS4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TBC1D3BA6NDS4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TBC1D3BA6NDS4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.05■□□□□ 0.32
TBC1D3BA6NDS4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.05■□□□□ 0.32
TBC1D3BA6NDS4 CROCCP2-202ENST00000412962 2773 ntBASIC17.05■□□□□ 0.32
TBC1D3BA6NDS4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TBC1D3BA6NDS4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TBC1D3BA6NDS4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TBC1D3BA6NDS4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.05■□□□□ 0.32
TBC1D3BA6NDS4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TBC1D3BA6NDS4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
TBC1D3BA6NDS4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.05■□□□□ 0.32
TBC1D3BA6NDS4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.05■□□□□ 0.32
TBC1D3BA6NDS4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.05■□□□□ 0.32
TBC1D3BA6NDS4 SPDYE14P-201ENST00000442619 822 ntBASIC17.05■□□□□ 0.32
TBC1D3BA6NDS4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TBC1D3BA6NDS4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.05■□□□□ 0.32
TBC1D3BA6NDS4 ALG1L8P-201ENST00000533887 760 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms