Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COMMD4Q9H0A8 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COMMD4Q9H0A8 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COMMD4Q9H0A8 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
COMMD4Q9H0A8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
COMMD4Q9H0A8 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COMMD4Q9H0A8 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.98□□□□□ -0.01
COMMD4Q9H0A8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COMMD4Q9H0A8 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COMMD4Q9H0A8 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
COMMD4Q9H0A8 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COMMD4Q9H0A8 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COMMD4Q9H0A8 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
COMMD4Q9H0A8 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COMMD4Q9H0A8 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 TSPY26P-202ENST00000565928 3884 ntBASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 AC246785.2-201ENST00000432512 513 ntBASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 AC104076.2-201ENST00000448912 469 ntBASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 AC083849.1-201ENST00000615227 514 ntBASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 CICP6-201ENST00000457191 2729 ntBASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COMMD4Q9H0A8 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 AL162727.3-201ENST00000635661 2787 ntBASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 SPDYE13P-201ENST00000445314 798 ntBASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 AC022616.7-201ENST00000525383 220 ntBASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 LINC01238-205ENST00000567549 1107 ntBASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 PCDHA1-201ENST00000378133 2726 ntBASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 AL645728.1-201ENST00000366221 2101 ntBASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 AC132938.5-201ENST00000624980 1813 ntBASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
COMMD4Q9H0A8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
COMMD4Q9H0A8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.02
COMMD4Q9H0A8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
COMMD4Q9H0A8 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.96□□□□□ -0.02
COMMD4Q9H0A8 AL021920.2-201ENST00000624828 1351 ntBASIC14.96□□□□□ -0.02
COMMD4Q9H0A8 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
COMMD4Q9H0A8 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.96□□□□□ -0.02
COMMD4Q9H0A8 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms