Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM47Q96LD4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TRIM47Q96LD4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM47Q96LD4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM47Q96LD4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM47Q96LD4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM47Q96LD4 AC009949.1-201ENST00000623048 1830 ntBASIC19.76■□□□□ 0.75
TRIM47Q96LD4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM47Q96LD4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM47Q96LD4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 ACTG1P4-201ENST00000425123 1122 ntBASIC19.75■□□□□ 0.75
TRIM47Q96LD4 KLF2P3-201ENST00000451977 1087 ntBASIC19.75■□□□□ 0.75
TRIM47Q96LD4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM47Q96LD4 AC133963.1-201ENST00000504166 1679 ntBASIC19.75■□□□□ 0.75
TRIM47Q96LD4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM47Q96LD4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM47Q96LD4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM47Q96LD4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TRIM47Q96LD4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM47Q96LD4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM47Q96LD4 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.74■□□□□ 0.75
TRIM47Q96LD4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM47Q96LD4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM47Q96LD4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
TRIM47Q96LD4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM47Q96LD4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM47Q96LD4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TRIM47Q96LD4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TRIM47Q96LD4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TRIM47Q96LD4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TRIM47Q96LD4 KRT18P32-201ENST00000424695 1287 ntBASIC19.74■□□□□ 0.75
TRIM47Q96LD4 GPS2P2-201ENST00000430745 888 ntBASIC19.74■□□□□ 0.75
TRIM47Q96LD4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.74■□□□□ 0.75
TRIM47Q96LD4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM47Q96LD4 AC116407.2-201ENST00000613639 860 ntBASIC19.74■□□□□ 0.75
TRIM47Q96LD4 AP001059.3-201ENST00000619053 235 ntBASIC19.74■□□□□ 0.75
TRIM47Q96LD4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM47Q96LD4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM47Q96LD4 AC108860.2-201ENST00000562760 2183 ntBASIC19.74■□□□□ 0.75
TRIM47Q96LD4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM47Q96LD4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
TRIM47Q96LD4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM47Q96LD4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM47Q96LD4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM47Q96LD4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM47Q96LD4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TRIM47Q96LD4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM47Q96LD4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 AC243562.1-201ENST00000560672 389 ntBASIC19.73■□□□□ 0.75
TRIM47Q96LD4 LINC02560-201ENST00000596379 459 ntBASIC19.73■□□□□ 0.75
TRIM47Q96LD4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TRIM47Q96LD4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms