Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
DDX11Q96FC9 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX11Q96FC9 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX11Q96FC9 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC20.08■□□□□ 0.81
DDX11Q96FC9 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX11Q96FC9 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
DDX11Q96FC9 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
DDX11Q96FC9 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.08■□□□□ 0.81
DDX11Q96FC9 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX11Q96FC9 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX11Q96FC9 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX11Q96FC9 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.08■□□□□ 0.81
DDX11Q96FC9 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX11Q96FC9 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX11Q96FC9 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.08■□□□□ 0.81
DDX11Q96FC9 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
DDX11Q96FC9 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.08■□□□□ 0.81
DDX11Q96FC9 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.08■□□□□ 0.81
DDX11Q96FC9 AC079781.4-201ENST00000641908 219 ntBASIC20.08■□□□□ 0.81
DDX11Q96FC9 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
DDX11Q96FC9 NCF1C-201ENST00000438382 1427 ntBASIC20.08■□□□□ 0.8
DDX11Q96FC9 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
DDX11Q96FC9 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX11Q96FC9 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX11Q96FC9 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX11Q96FC9 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DDX11Q96FC9 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
DDX11Q96FC9 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
DDX11Q96FC9 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
DDX11Q96FC9 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
DDX11Q96FC9 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.07■□□□□ 0.8
DDX11Q96FC9 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX11Q96FC9 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX11Q96FC9 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DDX11Q96FC9 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.07■□□□□ 0.8
DDX11Q96FC9 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.07■□□□□ 0.8
DDX11Q96FC9 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.07■□□□□ 0.8
DDX11Q96FC9 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.07■□□□□ 0.8
DDX11Q96FC9 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DDX11Q96FC9 MTDHP5-201ENST00000598980 586 ntBASIC20.07■□□□□ 0.8
DDX11Q96FC9 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.07■□□□□ 0.8
DDX11Q96FC9 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.07■□□□□ 0.8
DDX11Q96FC9 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DDX11Q96FC9 AC006504.4-201ENST00000592118 1568 ntBASIC20.07■□□□□ 0.8
DDX11Q96FC9 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX11Q96FC9 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
DDX11Q96FC9 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX11Q96FC9 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DDX11Q96FC9 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
DDX11Q96FC9 AC097637.2-201ENST00000624096 1997 ntBASIC20.06■□□□□ 0.8
DDX11Q96FC9 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX11Q96FC9 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX11Q96FC9 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
DDX11Q96FC9 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DDX11Q96FC9 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DDX11Q96FC9 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
DDX11Q96FC9 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DDX11Q96FC9 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.06■□□□□ 0.8
DDX11Q96FC9 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DDX11Q96FC9 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX11Q96FC9 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DDX11Q96FC9 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX11Q96FC9 CRYGEP-201ENST00000412192 528 ntBASIC20.06■□□□□ 0.8
DDX11Q96FC9 ELK2BP-201ENST00000415014 1224 ntBASIC20.06■□□□□ 0.8
DDX11Q96FC9 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.06■□□□□ 0.8
DDX11Q96FC9 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.06■□□□□ 0.8
DDX11Q96FC9 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.06■□□□□ 0.8
DDX11Q96FC9 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.06■□□□□ 0.8
DDX11Q96FC9 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.06■□□□□ 0.8
DDX11Q96FC9 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.06■□□□□ 0.8
DDX11Q96FC9 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.06■□□□□ 0.8
DDX11Q96FC9 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.06■□□□□ 0.8
DDX11Q96FC9 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.06■□□□□ 0.8
DDX11Q96FC9 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
DDX11Q96FC9 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DDX11Q96FC9 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
DDX11Q96FC9 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
DDX11Q96FC9 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.06■□□□□ 0.8
DDX11Q96FC9 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
DDX11Q96FC9 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DDX11Q96FC9 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.06■□□□□ 0.8
DDX11Q96FC9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
DDX11Q96FC9 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.05■□□□□ 0.8
DDX11Q96FC9 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DDX11Q96FC9 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.05■□□□□ 0.8
DDX11Q96FC9 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX11Q96FC9 PCDHA14-201ENST00000506751 2298 ntBASIC20.05■□□□□ 0.8
DDX11Q96FC9 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX11Q96FC9 AC092171.3-201ENST00000610122 2651 ntBASIC20.05■□□□□ 0.8
DDX11Q96FC9 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DDX11Q96FC9 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX11Q96FC9 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DDX11Q96FC9 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX11Q96FC9 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.05■□□□□ 0.8
DDX11Q96FC9 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
DDX11Q96FC9 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.05■□□□□ 0.8
DDX11Q96FC9 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DDX11Q96FC9 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX11Q96FC9 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.05■□□□□ 0.8
DDX11Q96FC9 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms