Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.05□□□□□ -0.16
ZNF439Q8NDP4 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 PRELID1P1-202ENST00000567272 903 ntBASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 NKAPP1-205ENST00000585790 367 ntBASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 AL353135.1-201ENST00000606729 504 ntBASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 AL355877.3-201ENST00000622820 899 ntBASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 AL022326.1-202ENST00000641533 845 ntBASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 AC018695.7-201ENST00000624587 2492 ntBASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ZNF439Q8NDP4 AL356309.3-201ENST00000624132 1934 ntBASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 AGGF1P2-201ENST00000426656 2106 ntBASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 FGFR3P6-201ENST00000457012 610 ntBASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 DUX4L17-201ENST00000557360 1267 ntBASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 AC091304.2-201ENST00000564639 760 ntBASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 MTDHP3-201ENST00000594186 672 ntBASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 REXO1L6P-202ENST00000619970 1078 ntBASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ZNF439Q8NDP4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms