Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 ELK2BP-201ENST00000415014 1224 ntBASIC17.41■□□□□ 0.38
PAF1Q8N7H5 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 AC116407.3-201ENST00000623905 1129 ntBASIC17.41■□□□□ 0.38
PAF1Q8N7H5 PGM5P2-202ENST00000637225 1043 ntBASIC17.41■□□□□ 0.38
PAF1Q8N7H5 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 AC098831.1-202ENST00000438821 336 ntBASIC17.4■□□□□ 0.38
PAF1Q8N7H5 AC012640.2-201ENST00000561606 901 ntBASIC17.4■□□□□ 0.38
PAF1Q8N7H5 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 AC004706.3-202ENST00000621574 984 ntBASIC17.4■□□□□ 0.38
PAF1Q8N7H5 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PAF1Q8N7H5 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
PAF1Q8N7H5 AL023806.1-201ENST00000603994 1649 ntBASIC17.39■□□□□ 0.38
PAF1Q8N7H5 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PAF1Q8N7H5 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
PAF1Q8N7H5 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PAF1Q8N7H5 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
PAF1Q8N7H5 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.39■□□□□ 0.37
PAF1Q8N7H5 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
PAF1Q8N7H5 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PAF1Q8N7H5 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PAF1Q8N7H5 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PAF1Q8N7H5 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PAF1Q8N7H5 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PAF1Q8N7H5 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PAF1Q8N7H5 PI4KAP1-204ENST00000612579 1703 ntBASIC17.39■□□□□ 0.37
PAF1Q8N7H5 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms