Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC27.13■■□□□ 1.93
SNAPC4Q5SXM2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC27.13■■□□□ 1.93
SNAPC4Q5SXM2 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SNAPC4Q5SXM2 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SNAPC4Q5SXM2 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SNAPC4Q5SXM2 KRT43P-201ENST00000434019 910 ntBASIC27.13■■□□□ 1.93
SNAPC4Q5SXM2 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC27.13■■□□□ 1.93
SNAPC4Q5SXM2 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SNAPC4Q5SXM2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC27.13■■□□□ 1.93
SNAPC4Q5SXM2 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SNAPC4Q5SXM2 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC27.13■■□□□ 1.93
SNAPC4Q5SXM2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SNAPC4Q5SXM2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SNAPC4Q5SXM2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
SNAPC4Q5SXM2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC27.12■■□□□ 1.93
SNAPC4Q5SXM2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC27.12■■□□□ 1.93
SNAPC4Q5SXM2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SNAPC4Q5SXM2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
SNAPC4Q5SXM2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC27.12■■□□□ 1.93
SNAPC4Q5SXM2 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SNAPC4Q5SXM2 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC27.12■■□□□ 1.93
SNAPC4Q5SXM2 RHOA-206ENST00000454011 889 ntTSL 2 BASIC27.12■■□□□ 1.93
SNAPC4Q5SXM2 MIR5189-201ENST00000577370 114 ntBASIC27.12■■□□□ 1.93
SNAPC4Q5SXM2 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC27.12■■□□□ 1.93
SNAPC4Q5SXM2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SNAPC4Q5SXM2 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
SNAPC4Q5SXM2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC27.11■■□□□ 1.93
SNAPC4Q5SXM2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SNAPC4Q5SXM2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC27.11■■□□□ 1.93
SNAPC4Q5SXM2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SNAPC4Q5SXM2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SNAPC4Q5SXM2 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SNAPC4Q5SXM2 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SNAPC4Q5SXM2 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
SNAPC4Q5SXM2 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC27.11■■□□□ 1.93
SNAPC4Q5SXM2 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC27.11■■□□□ 1.93
SNAPC4Q5SXM2 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SNAPC4Q5SXM2 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC27.11■■□□□ 1.93
SNAPC4Q5SXM2 ARL16-210ENST00000574938 751 ntTSL 2 BASIC27.11■■□□□ 1.93
SNAPC4Q5SXM2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC27.1■■□□□ 1.93
SNAPC4Q5SXM2 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
SNAPC4Q5SXM2 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
SNAPC4Q5SXM2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC27.1■■□□□ 1.93
SNAPC4Q5SXM2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC27.1■■□□□ 1.93
SNAPC4Q5SXM2 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC27.1■■□□□ 1.93
SNAPC4Q5SXM2 CLK3P2-201ENST00000427566 1453 ntBASIC27.1■■□□□ 1.93
SNAPC4Q5SXM2 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
SNAPC4Q5SXM2 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC27.1■■□□□ 1.93
SNAPC4Q5SXM2 GOLGA2P4-201ENST00000441462 777 ntBASIC27.1■■□□□ 1.93
SNAPC4Q5SXM2 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC27.1■■□□□ 1.93
SNAPC4Q5SXM2 AC061975.2-201ENST00000581722 295 ntBASIC27.1■■□□□ 1.93
SNAPC4Q5SXM2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SNAPC4Q5SXM2 BTNL10-201ENST00000595971 695 ntBASIC27.1■■□□□ 1.93
SNAPC4Q5SXM2 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC27.1■■□□□ 1.93
SNAPC4Q5SXM2 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC27.1■■□□□ 1.93
SNAPC4Q5SXM2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SNAPC4Q5SXM2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SNAPC4Q5SXM2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
SNAPC4Q5SXM2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC27.09■■□□□ 1.93
SNAPC4Q5SXM2 AC104581.1-202ENST00000635932 2618 ntBASIC27.09■■□□□ 1.93
SNAPC4Q5SXM2 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SNAPC4Q5SXM2 AL021920.2-201ENST00000624828 1351 ntBASIC27.09■■□□□ 1.93
SNAPC4Q5SXM2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC27.09■■□□□ 1.93
SNAPC4Q5SXM2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SNAPC4Q5SXM2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC27.09■■□□□ 1.93
SNAPC4Q5SXM2 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
SNAPC4Q5SXM2 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC27.09■■□□□ 1.93
SNAPC4Q5SXM2 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SNAPC4Q5SXM2 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SNAPC4Q5SXM2 NSL1-201ENST00000366976 722 ntTSL 2 BASIC27.09■■□□□ 1.93
SNAPC4Q5SXM2 APOC3-202ENST00000375345 604 ntTSL 5 BASIC27.09■■□□□ 1.93
SNAPC4Q5SXM2 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SNAPC4Q5SXM2 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC27.09■■□□□ 1.93
SNAPC4Q5SXM2 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC27.09■■□□□ 1.93
SNAPC4Q5SXM2 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC27.09■■□□□ 1.93
SNAPC4Q5SXM2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC27.09■■□□□ 1.93
SNAPC4Q5SXM2 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC27.09■■□□□ 1.93
SNAPC4Q5SXM2 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SNAPC4Q5SXM2 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SNAPC4Q5SXM2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SNAPC4Q5SXM2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC27.09■■□□□ 1.93
SNAPC4Q5SXM2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
SNAPC4Q5SXM2 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
SNAPC4Q5SXM2 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC27.08■■□□□ 1.93
SNAPC4Q5SXM2 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC27.08■■□□□ 1.93
SNAPC4Q5SXM2 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC27.08■■□□□ 1.93
SNAPC4Q5SXM2 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC27.08■■□□□ 1.93
SNAPC4Q5SXM2 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC27.08■■□□□ 1.93
SNAPC4Q5SXM2 AL391069.4-201ENST00000609583 481 ntBASIC27.08■■□□□ 1.93
SNAPC4Q5SXM2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC27.08■■□□□ 1.93
SNAPC4Q5SXM2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
SNAPC4Q5SXM2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SNAPC4Q5SXM2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
SNAPC4Q5SXM2 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC27.08■■□□□ 1.93
SNAPC4Q5SXM2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
SNAPC4Q5SXM2 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SNAPC4Q5SXM2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
SNAPC4Q5SXM2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC27.08■■□□□ 1.92
SNAPC4Q5SXM2 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC27.07■■□□□ 1.92
SNAPC4Q5SXM2 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC27.07■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms