Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.26■□□□□ 0.03
CDK5Q00535 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDK5Q00535 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK5Q00535 AC016734.2-201ENST00000624325 1377 ntBASIC15.26■□□□□ 0.03
CDK5Q00535 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CDK5Q00535 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK5Q00535 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK5Q00535 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK5Q00535 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK5Q00535 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK5Q00535 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.26■□□□□ 0.03
CDK5Q00535 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.26■□□□□ 0.03
CDK5Q00535 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CDK5Q00535 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.26■□□□□ 0.03
CDK5Q00535 RCN1P2-201ENST00000398357 915 ntBASIC15.26■□□□□ 0.03
CDK5Q00535 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK5Q00535 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CDK5Q00535 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK5Q00535 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.26■□□□□ 0.03
CDK5Q00535 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDK5Q00535 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
CDK5Q00535 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
CDK5Q00535 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.26■□□□□ 0.03
CDK5Q00535 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CDK5Q00535 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CDK5Q00535 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.26■□□□□ 0.03
CDK5Q00535 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK5Q00535 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CDK5Q00535 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK5Q00535 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.26■□□□□ 0.03
CDK5Q00535 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.26■□□□□ 0.03
CDK5Q00535 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK5Q00535 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK5Q00535 AL596257.1-201ENST00000641463 2694 ntBASIC15.26■□□□□ 0.03
CDK5Q00535 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CDK5Q00535 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.26■□□□□ 0.03
CDK5Q00535 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDK5Q00535 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDK5Q00535 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.26■□□□□ 0.03
CDK5Q00535 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDK5Q00535 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK5Q00535 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
CDK5Q00535 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDK5Q00535 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.25■□□□□ 0.03
CDK5Q00535 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDK5Q00535 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.25■□□□□ 0.03
CDK5Q00535 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDK5Q00535 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDK5Q00535 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK5Q00535 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CDK5Q00535 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK5Q00535 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CDK5Q00535 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.25■□□□□ 0.03
CDK5Q00535 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK5Q00535 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.25■□□□□ 0.03
CDK5Q00535 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
CDK5Q00535 BNIP3P18-201ENST00000593976 575 ntBASIC15.25■□□□□ 0.03
CDK5Q00535 TERC-201ENST00000602385 541 ntBASIC15.25■□□□□ 0.03
CDK5Q00535 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CDK5Q00535 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK5Q00535 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK5Q00535 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK5Q00535 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK5Q00535 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDK5Q00535 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.25■□□□□ 0.03
CDK5Q00535 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDK5Q00535 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK5Q00535 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK5Q00535 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.25■□□□□ 0.03
CDK5Q00535 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK5Q00535 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.25■□□□□ 0.03
CDK5Q00535 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK5Q00535 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CDK5Q00535 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDK5Q00535 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK5Q00535 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDK5Q00535 AC243591.1-201ENST00000452967 1364 ntBASIC15.24■□□□□ 0.03
CDK5Q00535 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDK5Q00535 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDK5Q00535 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDK5Q00535 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CDK5Q00535 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.24■□□□□ 0.03
CDK5Q00535 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDK5Q00535 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDK5Q00535 AL590787.1-201ENST00000568856 1315 ntBASIC15.24■□□□□ 0.03
CDK5Q00535 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.24■□□□□ 0.03
CDK5Q00535 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.24■□□□□ 0.03
CDK5Q00535 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDK5Q00535 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDK5Q00535 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDK5Q00535 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDK5Q00535 DUX4L26-201ENST00000489078 1255 ntBASIC15.24■□□□□ 0.03
CDK5Q00535 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.24■□□□□ 0.03
CDK5Q00535 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.24■□□□□ 0.03
CDK5Q00535 AL603832.2-201ENST00000566195 2125 ntBASIC15.24■□□□□ 0.03
CDK5Q00535 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.24■□□□□ 0.03
CDK5Q00535 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDK5Q00535 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDK5Q00535 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.24■□□□□ 0.03
CDK5Q00535 AC073592.4-201ENST00000623827 446 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms