Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.66■□□□□ 0.74
IRX3P78415 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
IRX3P78415 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
IRX3P78415 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
IRX3P78415 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
IRX3P78415 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
IRX3P78415 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
IRX3P78415 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
IRX3P78415 UXT-AS1-201ENST00000590504 1525 ntBASIC19.66■□□□□ 0.74
IRX3P78415 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
IRX3P78415 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
IRX3P78415 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IRX3P78415 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IRX3P78415 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IRX3P78415 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.65■□□□□ 0.74
IRX3P78415 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IRX3P78415 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.65■□□□□ 0.74
IRX3P78415 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
IRX3P78415 ABALON-201ENST00000629058 1903 ntBASIC19.65■□□□□ 0.74
IRX3P78415 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.65■□□□□ 0.74
IRX3P78415 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IRX3P78415 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.65■□□□□ 0.74
IRX3P78415 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.65■□□□□ 0.74
IRX3P78415 AC125807.1-201ENST00000483097 614 ntBASIC19.65■□□□□ 0.74
IRX3P78415 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
IRX3P78415 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.65■□□□□ 0.74
IRX3P78415 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.65■□□□□ 0.74
IRX3P78415 AL009183.1-201ENST00000603760 355 ntBASIC19.65■□□□□ 0.74
IRX3P78415 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
IRX3P78415 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
IRX3P78415 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IRX3P78415 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IRX3P78415 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IRX3P78415 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IRX3P78415 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.65■□□□□ 0.74
IRX3P78415 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.65■□□□□ 0.74
IRX3P78415 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IRX3P78415 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
IRX3P78415 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IRX3P78415 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
IRX3P78415 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
IRX3P78415 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
IRX3P78415 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
IRX3P78415 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.64■□□□□ 0.74
IRX3P78415 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
IRX3P78415 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
IRX3P78415 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IRX3P78415 CICP6-201ENST00000457191 2729 ntBASIC19.64■□□□□ 0.73
IRX3P78415 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IRX3P78415 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IRX3P78415 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IRX3P78415 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
IRX3P78415 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
IRX3P78415 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
IRX3P78415 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.64■□□□□ 0.73
IRX3P78415 AC107890.1-201ENST00000422478 521 ntBASIC19.64■□□□□ 0.73
IRX3P78415 GPS2P2-201ENST00000430745 888 ntBASIC19.64■□□□□ 0.73
IRX3P78415 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
IRX3P78415 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
IRX3P78415 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
IRX3P78415 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
IRX3P78415 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.64■□□□□ 0.73
IRX3P78415 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.64■□□□□ 0.73
IRX3P78415 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.64■□□□□ 0.73
IRX3P78415 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.64■□□□□ 0.73
IRX3P78415 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IRX3P78415 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
IRX3P78415 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.64■□□□□ 0.73
IRX3P78415 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.64■□□□□ 0.73
IRX3P78415 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IRX3P78415 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
IRX3P78415 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.64■□□□□ 0.73
IRX3P78415 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
IRX3P78415 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IRX3P78415 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
IRX3P78415 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.64■□□□□ 0.73
IRX3P78415 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.64■□□□□ 0.73
IRX3P78415 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
IRX3P78415 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IRX3P78415 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IRX3P78415 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
IRX3P78415 AL390961.4-201ENST00000623958 2535 ntBASIC19.63■□□□□ 0.73
IRX3P78415 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
IRX3P78415 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.63■□□□□ 0.73
IRX3P78415 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IRX3P78415 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
IRX3P78415 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IRX3P78415 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IRX3P78415 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
IRX3P78415 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.63■□□□□ 0.73
IRX3P78415 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
IRX3P78415 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.63■□□□□ 0.73
IRX3P78415 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.63■□□□□ 0.73
IRX3P78415 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
IRX3P78415 AC190387.1-201ENST00000551683 408 ntBASIC19.63■□□□□ 0.73
IRX3P78415 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.63■□□□□ 0.73
IRX3P78415 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.63■□□□□ 0.73
IRX3P78415 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.63■□□□□ 0.73
IRX3P78415 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IRX3P78415 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms