Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ATP1B3P54709 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.73□□□□□ -0.05
ATP1B3P54709 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
ATP1B3P54709 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.73□□□□□ -0.05
ATP1B3P54709 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ATP1B3P54709 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ATP1B3P54709 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ATP1B3P54709 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ATP1B3P54709 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
ATP1B3P54709 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATP1B3P54709 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.72□□□□□ -0.05
ATP1B3P54709 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
ATP1B3P54709 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATP1B3P54709 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATP1B3P54709 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATP1B3P54709 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ATP1B3P54709 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
ATP1B3P54709 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.72□□□□□ -0.05
ATP1B3P54709 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATP1B3P54709 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATP1B3P54709 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATP1B3P54709 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
ATP1B3P54709 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATP1B3P54709 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATP1B3P54709 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.72□□□□□ -0.05
ATP1B3P54709 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ATP1B3P54709 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATP1B3P54709 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
ATP1B3P54709 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.72□□□□□ -0.05
ATP1B3P54709 RCN1P2-201ENST00000398357 915 ntBASIC14.72□□□□□ -0.05
ATP1B3P54709 IGHV3-47-201ENST00000425060 335 ntBASIC14.72□□□□□ -0.05
ATP1B3P54709 AP002383.4-201ENST00000442518 975 ntBASIC14.72□□□□□ -0.05
ATP1B3P54709 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.72□□□□□ -0.05
ATP1B3P54709 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ATP1B3P54709 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.72□□□□□ -0.05
ATP1B3P54709 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.72□□□□□ -0.05
ATP1B3P54709 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.72□□□□□ -0.05
ATP1B3P54709 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
ATP1B3P54709 BNIP3P18-201ENST00000593976 575 ntBASIC14.72□□□□□ -0.05
ATP1B3P54709 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ATP1B3P54709 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
ATP1B3P54709 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ATP1B3P54709 AP000550.4-202ENST00000639755 178 ntBASIC14.72□□□□□ -0.05
ATP1B3P54709 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATP1B3P54709 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATP1B3P54709 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATP1B3P54709 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
ATP1B3P54709 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
ATP1B3P54709 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ATP1B3P54709 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.72□□□□□ -0.05
ATP1B3P54709 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ATP1B3P54709 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
ATP1B3P54709 AL356309.3-201ENST00000624132 1934 ntBASIC14.72□□□□□ -0.05
ATP1B3P54709 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ATP1B3P54709 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ATP1B3P54709 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
ATP1B3P54709 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.71□□□□□ -0.05
ATP1B3P54709 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.71□□□□□ -0.05
ATP1B3P54709 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ATP1B3P54709 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATP1B3P54709 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
ATP1B3P54709 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ATP1B3P54709 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.71□□□□□ -0.05
ATP1B3P54709 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
ATP1B3P54709 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATP1B3P54709 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
ATP1B3P54709 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATP1B3P54709 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATP1B3P54709 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.71□□□□□ -0.05
ATP1B3P54709 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATP1B3P54709 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ATP1B3P54709 AP000867.3-201ENST00000524675 377 ntBASIC14.71□□□□□ -0.05
ATP1B3P54709 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.71□□□□□ -0.05
ATP1B3P54709 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.71□□□□□ -0.05
ATP1B3P54709 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
ATP1B3P54709 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.71□□□□□ -0.05
ATP1B3P54709 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.71□□□□□ -0.05
ATP1B3P54709 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATP1B3P54709 AC114341.1-201ENST00000618070 349 ntBASIC14.71□□□□□ -0.05
ATP1B3P54709 PMPCAP1-201ENST00000508114 1576 ntBASIC14.71□□□□□ -0.05
ATP1B3P54709 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATP1B3P54709 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATP1B3P54709 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATP1B3P54709 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
ATP1B3P54709 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
ATP1B3P54709 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ATP1B3P54709 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
ATP1B3P54709 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
ATP1B3P54709 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.71□□□□□ -0.06
ATP1B3P54709 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.71□□□□□ -0.06
ATP1B3P54709 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
ATP1B3P54709 AC006449.5-201ENST00000610658 2098 ntBASIC14.7□□□□□ -0.06
ATP1B3P54709 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ATP1B3P54709 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.7□□□□□ -0.06
ATP1B3P54709 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.7□□□□□ -0.06
ATP1B3P54709 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.7□□□□□ -0.06
ATP1B3P54709 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ATP1B3P54709 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ATP1B3P54709 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ATP1B3P54709 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms