Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRE11P49959 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRE11P49959 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRE11P49959 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.75■□□□□ 0.75
MRE11P49959 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MRE11P49959 AC244107.1-201ENST00000442033 332 ntBASIC19.75■□□□□ 0.75
MRE11P49959 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.75■□□□□ 0.75
MRE11P49959 CCR12P-201ENST00000446203 998 ntBASIC19.75■□□□□ 0.75
MRE11P49959 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.75■□□□□ 0.75
MRE11P49959 AC008040.2-201ENST00000461049 708 ntBASIC19.75■□□□□ 0.75
MRE11P49959 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.75■□□□□ 0.75
MRE11P49959 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.75■□□□□ 0.75
MRE11P49959 ZNF444P1-201ENST00000559497 298 ntBASIC19.75■□□□□ 0.75
MRE11P49959 AL441883.1-201ENST00000566170 1045 ntBASIC19.75■□□□□ 0.75
MRE11P49959 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.75■□□□□ 0.75
MRE11P49959 AL139327.4-201ENST00000612362 153 ntBASIC19.75■□□□□ 0.75
MRE11P49959 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.75■□□□□ 0.75
MRE11P49959 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.75■□□□□ 0.75
MRE11P49959 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
MRE11P49959 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRE11P49959 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRE11P49959 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.75■□□□□ 0.75
MRE11P49959 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.75■□□□□ 0.75
MRE11P49959 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.75■□□□□ 0.75
MRE11P49959 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRE11P49959 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.75■□□□□ 0.75
MRE11P49959 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.75■□□□□ 0.75
MRE11P49959 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
MRE11P49959 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRE11P49959 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.75■□□□□ 0.75
MRE11P49959 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRE11P49959 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
MRE11P49959 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
MRE11P49959 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MRE11P49959 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
MRE11P49959 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.74■□□□□ 0.75
MRE11P49959 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
MRE11P49959 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MRE11P49959 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MRE11P49959 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.74■□□□□ 0.75
MRE11P49959 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.74■□□□□ 0.75
MRE11P49959 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.74■□□□□ 0.75
MRE11P49959 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
MRE11P49959 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
MRE11P49959 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.74■□□□□ 0.75
MRE11P49959 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MRE11P49959 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.74■□□□□ 0.75
MRE11P49959 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.74■□□□□ 0.75
MRE11P49959 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.74■□□□□ 0.75
MRE11P49959 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.74■□□□□ 0.75
MRE11P49959 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
MRE11P49959 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
MRE11P49959 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.74■□□□□ 0.75
MRE11P49959 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
MRE11P49959 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.74■□□□□ 0.75
MRE11P49959 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
MRE11P49959 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.74■□□□□ 0.75
MRE11P49959 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
MRE11P49959 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.74■□□□□ 0.75
MRE11P49959 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.74■□□□□ 0.75
MRE11P49959 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MRE11P49959 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MRE11P49959 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MRE11P49959 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
MRE11P49959 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRE11P49959 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRE11P49959 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MRE11P49959 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.73■□□□□ 0.75
MRE11P49959 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRE11P49959 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
MRE11P49959 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRE11P49959 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRE11P49959 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRE11P49959 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRE11P49959 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRE11P49959 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.73■□□□□ 0.75
MRE11P49959 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.73■□□□□ 0.75
MRE11P49959 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.73■□□□□ 0.75
MRE11P49959 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.73■□□□□ 0.75
MRE11P49959 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.73■□□□□ 0.75
MRE11P49959 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRE11P49959 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRE11P49959 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRE11P49959 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.73■□□□□ 0.75
MRE11P49959 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC19.73■□□□□ 0.75
MRE11P49959 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
MRE11P49959 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.73■□□□□ 0.75
MRE11P49959 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.73■□□□□ 0.75
MRE11P49959 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.73■□□□□ 0.75
MRE11P49959 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC19.73■□□□□ 0.75
MRE11P49959 CASK-202ENST00000378158 3848 ntTSL 5 BASIC19.73■□□□□ 0.75
MRE11P49959 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MRE11P49959 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MRE11P49959 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
MRE11P49959 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
MRE11P49959 ALOX12P2-203ENST00000570921 1945 ntBASIC19.72■□□□□ 0.75
MRE11P49959 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MRE11P49959 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MRE11P49959 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC19.72■□□□□ 0.75
MRE11P49959 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms