Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.23■□□□□ 0.03
SOX6P35712 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SOX6P35712 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SOX6P35712 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SOX6P35712 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SOX6P35712 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
SOX6P35712 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SOX6P35712 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SOX6P35712 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SOX6P35712 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SOX6P35712 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SOX6P35712 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.23■□□□□ 0.03
SOX6P35712 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SOX6P35712 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SOX6P35712 AL391256.1-201ENST00000443260 1855 ntBASIC15.23■□□□□ 0.03
SOX6P35712 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SOX6P35712 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SOX6P35712 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SOX6P35712 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SOX6P35712 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.22■□□□□ 0.03
SOX6P35712 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SOX6P35712 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SOX6P35712 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SOX6P35712 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.22■□□□□ 0.03
SOX6P35712 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SOX6P35712 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SOX6P35712 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.22■□□□□ 0.03
SOX6P35712 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SOX6P35712 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SOX6P35712 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SOX6P35712 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SOX6P35712 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SOX6P35712 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SOX6P35712 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SOX6P35712 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SOX6P35712 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SOX6P35712 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SOX6P35712 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
SOX6P35712 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.22■□□□□ 0.03
SOX6P35712 MFAP1P1-201ENST00000442257 1255 ntBASIC15.22■□□□□ 0.03
SOX6P35712 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.22■□□□□ 0.03
SOX6P35712 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.22■□□□□ 0.03
SOX6P35712 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SOX6P35712 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.22■□□□□ 0.03
SOX6P35712 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SOX6P35712 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SOX6P35712 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SOX6P35712 AC006058.4-201ENST00000624016 1670 ntBASIC15.22■□□□□ 0.03
SOX6P35712 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
SOX6P35712 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SOX6P35712 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SOX6P35712 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SOX6P35712 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SOX6P35712 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SOX6P35712 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SOX6P35712 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SOX6P35712 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SOX6P35712 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SOX6P35712 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SOX6P35712 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SOX6P35712 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.21■□□□□ 0.03
SOX6P35712 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
SOX6P35712 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SOX6P35712 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SOX6P35712 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
SOX6P35712 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SOX6P35712 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.21■□□□□ 0.03
SOX6P35712 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SOX6P35712 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.21■□□□□ 0.03
SOX6P35712 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
SOX6P35712 AC116562.2-201ENST00000507042 360 ntBASIC15.21■□□□□ 0.03
SOX6P35712 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.21■□□□□ 0.03
SOX6P35712 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.21■□□□□ 0.03
SOX6P35712 WWOX-216ENST00000569818 525 ntBASIC15.21■□□□□ 0.03
SOX6P35712 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SOX6P35712 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.21■□□□□ 0.03
SOX6P35712 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.21■□□□□ 0.03
SOX6P35712 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.21■□□□□ 0.03
SOX6P35712 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SOX6P35712 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SOX6P35712 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.21■□□□□ 0.03
SOX6P35712 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SOX6P35712 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SOX6P35712 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
SOX6P35712 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SOX6P35712 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.21■□□□□ 0.02
SOX6P35712 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SOX6P35712 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
SOX6P35712 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.21■□□□□ 0.02
SOX6P35712 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SOX6P35712 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SOX6P35712 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
SOX6P35712 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
SOX6P35712 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SOX6P35712 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SOX6P35712 AC022532.1-201ENST00000624563 1728 ntBASIC15.2■□□□□ 0.02
SOX6P35712 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SOX6P35712 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SOX6P35712 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.2■□□□□ 0.02
SOX6P35712 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms