Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HOXC6P09630 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
HOXC6P09630 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HOXC6P09630 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.94■□□□□ 0.62
HOXC6P09630 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HOXC6P09630 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HOXC6P09630 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HOXC6P09630 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
HOXC6P09630 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.94■□□□□ 0.62
HOXC6P09630 AC093525.9-201ENST00000624961 1746 ntBASIC18.94■□□□□ 0.62
HOXC6P09630 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.94■□□□□ 0.62
HOXC6P09630 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HOXC6P09630 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.94■□□□□ 0.62
HOXC6P09630 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HOXC6P09630 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HOXC6P09630 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.93■□□□□ 0.62
HOXC6P09630 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HOXC6P09630 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HOXC6P09630 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HOXC6P09630 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.93■□□□□ 0.62
HOXC6P09630 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HOXC6P09630 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HOXC6P09630 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HOXC6P09630 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HOXC6P09630 HLA-H-201ENST00000383620 1096 ntBASIC18.93■□□□□ 0.62
HOXC6P09630 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HOXC6P09630 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.93■□□□□ 0.62
HOXC6P09630 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
HOXC6P09630 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.93■□□□□ 0.62
HOXC6P09630 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.93■□□□□ 0.62
HOXC6P09630 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.93■□□□□ 0.62
HOXC6P09630 AL359881.2-201ENST00000602973 570 ntBASIC18.93■□□□□ 0.62
HOXC6P09630 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.93■□□□□ 0.62
HOXC6P09630 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HOXC6P09630 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HOXC6P09630 FRMD8P1-201ENST00000440433 1524 ntBASIC18.93■□□□□ 0.62
HOXC6P09630 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
HOXC6P09630 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HOXC6P09630 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HOXC6P09630 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HOXC6P09630 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HOXC6P09630 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
HOXC6P09630 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HOXC6P09630 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.93■□□□□ 0.62
HOXC6P09630 AL021920.2-201ENST00000624828 1351 ntBASIC18.93■□□□□ 0.62
HOXC6P09630 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXC6P09630 CU639417.3-201ENST00000624240 1404 ntBASIC18.92■□□□□ 0.62
HOXC6P09630 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXC6P09630 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXC6P09630 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HOXC6P09630 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HOXC6P09630 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
HOXC6P09630 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HOXC6P09630 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.92■□□□□ 0.62
HOXC6P09630 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.92■□□□□ 0.62
HOXC6P09630 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HOXC6P09630 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.92■□□□□ 0.62
HOXC6P09630 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HOXC6P09630 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.92■□□□□ 0.62
HOXC6P09630 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HOXC6P09630 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.92■□□□□ 0.62
HOXC6P09630 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HOXC6P09630 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.92■□□□□ 0.62
HOXC6P09630 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.92■□□□□ 0.62
HOXC6P09630 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXC6P09630 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.92■□□□□ 0.62
HOXC6P09630 AC009407.1-201ENST00000568958 598 ntBASIC18.92■□□□□ 0.62
HOXC6P09630 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.92■□□□□ 0.62
HOXC6P09630 AL008721.1-201ENST00000609964 604 ntBASIC18.92■□□□□ 0.62
HOXC6P09630 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.92■□□□□ 0.62
HOXC6P09630 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.92■□□□□ 0.62
HOXC6P09630 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HOXC6P09630 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HOXC6P09630 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.92■□□□□ 0.62
HOXC6P09630 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.92■□□□□ 0.62
HOXC6P09630 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXC6P09630 AC087499.5-201ENST00000452760 1342 ntBASIC18.92■□□□□ 0.62
HOXC6P09630 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.92■□□□□ 0.62
HOXC6P09630 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.92■□□□□ 0.62
HOXC6P09630 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXC6P09630 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HOXC6P09630 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HOXC6P09630 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.92■□□□□ 0.62
HOXC6P09630 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXC6P09630 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HOXC6P09630 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXC6P09630 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.91■□□□□ 0.62
HOXC6P09630 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HOXC6P09630 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.91■□□□□ 0.62
HOXC6P09630 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXC6P09630 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXC6P09630 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.91■□□□□ 0.62
HOXC6P09630 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXC6P09630 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
HOXC6P09630 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXC6P09630 FAM220BP-201ENST00000377689 816 ntBASIC18.91■□□□□ 0.62
HOXC6P09630 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HOXC6P09630 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXC6P09630 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXC6P09630 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms