Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
MT-ND1P03886 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16■□□□□ 0.15
MT-ND1P03886 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16■□□□□ 0.15
MT-ND1P03886 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
MT-ND1P03886 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16■□□□□ 0.15
MT-ND1P03886 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
MT-ND1P03886 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16■□□□□ 0.15
MT-ND1P03886 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16■□□□□ 0.15
MT-ND1P03886 SPDYE13P-201ENST00000445314 798 ntBASIC16■□□□□ 0.15
MT-ND1P03886 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16■□□□□ 0.15
MT-ND1P03886 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MT-ND1P03886 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16■□□□□ 0.15
MT-ND1P03886 AC083849.1-201ENST00000615227 514 ntBASIC16■□□□□ 0.15
MT-ND1P03886 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MT-ND1P03886 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
MT-ND1P03886 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16■□□□□ 0.15
MT-ND1P03886 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
MT-ND1P03886 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
MT-ND1P03886 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MT-ND1P03886 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16■□□□□ 0.15
MT-ND1P03886 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
MT-ND1P03886 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
MT-ND1P03886 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
MT-ND1P03886 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
MT-ND1P03886 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16■□□□□ 0.15
MT-ND1P03886 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16■□□□□ 0.15
MT-ND1P03886 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.99■□□□□ 0.15
MT-ND1P03886 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND1P03886 AL513477.1-201ENST00000602865 2407 ntBASIC15.99■□□□□ 0.15
MT-ND1P03886 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND1P03886 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND1P03886 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND1P03886 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND1P03886 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.99■□□□□ 0.15
MT-ND1P03886 AL135999.2-201ENST00000622438 1686 ntBASIC15.99■□□□□ 0.15
MT-ND1P03886 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
MT-ND1P03886 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND1P03886 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.99■□□□□ 0.15
MT-ND1P03886 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.99■□□□□ 0.15
MT-ND1P03886 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND1P03886 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND1P03886 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.99■□□□□ 0.15
MT-ND1P03886 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND1P03886 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND1P03886 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND1P03886 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND1P03886 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND1P03886 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND1P03886 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND1P03886 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND1P03886 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND1P03886 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.99■□□□□ 0.15
MT-ND1P03886 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND1P03886 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.99■□□□□ 0.15
MT-ND1P03886 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.99■□□□□ 0.15
MT-ND1P03886 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.99■□□□□ 0.15
MT-ND1P03886 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.99■□□□□ 0.15
MT-ND1P03886 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.99■□□□□ 0.15
MT-ND1P03886 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND1P03886 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.99■□□□□ 0.15
MT-ND1P03886 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND1P03886 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.99■□□□□ 0.15
MT-ND1P03886 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.99■□□□□ 0.15
MT-ND1P03886 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
MT-ND1P03886 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
MT-ND1P03886 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
MT-ND1P03886 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.99■□□□□ 0.15
MT-ND1P03886 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
MT-ND1P03886 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
MT-ND1P03886 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.99■□□□□ 0.15
MT-ND1P03886 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
MT-ND1P03886 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND1P03886 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND1P03886 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND1P03886 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
MT-ND1P03886 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
MT-ND1P03886 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND1P03886 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND1P03886 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.98■□□□□ 0.15
MT-ND1P03886 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND1P03886 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.98■□□□□ 0.15
MT-ND1P03886 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND1P03886 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.98■□□□□ 0.15
MT-ND1P03886 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.98■□□□□ 0.15
MT-ND1P03886 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND1P03886 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND1P03886 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND1P03886 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND1P03886 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND1P03886 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.98■□□□□ 0.15
MT-ND1P03886 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND1P03886 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND1P03886 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND1P03886 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.98■□□□□ 0.15
MT-ND1P03886 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND1P03886 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
MT-ND1P03886 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.98■□□□□ 0.15
MT-ND1P03886 AC022616.7-201ENST00000525383 220 ntBASIC15.98■□□□□ 0.15
MT-ND1P03886 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.98■□□□□ 0.15
MT-ND1P03886 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms