Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.4■□□□□ 0.38
TSPAN3O60637 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TSPAN3O60637 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.4■□□□□ 0.38
TSPAN3O60637 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.4■□□□□ 0.38
TSPAN3O60637 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.4■□□□□ 0.38
TSPAN3O60637 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSPAN3O60637 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.4■□□□□ 0.38
TSPAN3O60637 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.4■□□□□ 0.38
TSPAN3O60637 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSPAN3O60637 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSPAN3O60637 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.4■□□□□ 0.38
TSPAN3O60637 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TSPAN3O60637 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TSPAN3O60637 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSPAN3O60637 AL645608.8-201ENST00000606034 2086 ntBASIC17.4■□□□□ 0.38
TSPAN3O60637 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TSPAN3O60637 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
TSPAN3O60637 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.39■□□□□ 0.37
TSPAN3O60637 AC108860.2-201ENST00000562760 2183 ntBASIC17.39■□□□□ 0.37
TSPAN3O60637 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TSPAN3O60637 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.39■□□□□ 0.37
TSPAN3O60637 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TSPAN3O60637 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TSPAN3O60637 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TSPAN3O60637 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
TSPAN3O60637 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TSPAN3O60637 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.39■□□□□ 0.37
TSPAN3O60637 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.39■□□□□ 0.37
TSPAN3O60637 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.39■□□□□ 0.37
TSPAN3O60637 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.39■□□□□ 0.37
TSPAN3O60637 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TSPAN3O60637 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.39■□□□□ 0.37
TSPAN3O60637 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.39■□□□□ 0.37
TSPAN3O60637 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
TSPAN3O60637 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TSPAN3O60637 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TSPAN3O60637 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.39■□□□□ 0.37
TSPAN3O60637 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TSPAN3O60637 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TSPAN3O60637 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TSPAN3O60637 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TSPAN3O60637 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN3O60637 KRT8P49-201ENST00000604166 1432 ntBASIC17.38■□□□□ 0.37
TSPAN3O60637 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.38■□□□□ 0.37
TSPAN3O60637 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN3O60637 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TSPAN3O60637 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN3O60637 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN3O60637 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
TSPAN3O60637 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN3O60637 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN3O60637 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.38■□□□□ 0.37
TSPAN3O60637 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN3O60637 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN3O60637 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TSPAN3O60637 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN3O60637 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN3O60637 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TSPAN3O60637 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN3O60637 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.38■□□□□ 0.37
TSPAN3O60637 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN3O60637 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.38■□□□□ 0.37
TSPAN3O60637 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.38■□□□□ 0.37
TSPAN3O60637 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.38■□□□□ 0.37
TSPAN3O60637 SNHG9-202ENST00000564014 471 ntBASIC17.38■□□□□ 0.37
TSPAN3O60637 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.38■□□□□ 0.37
TSPAN3O60637 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.38■□□□□ 0.37
TSPAN3O60637 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.38■□□□□ 0.37
TSPAN3O60637 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN3O60637 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN3O60637 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.38■□□□□ 0.37
TSPAN3O60637 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.38■□□□□ 0.37
TSPAN3O60637 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN3O60637 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN3O60637 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN3O60637 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.38■□□□□ 0.37
TSPAN3O60637 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.38■□□□□ 0.37
TSPAN3O60637 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.38■□□□□ 0.37
TSPAN3O60637 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN3O60637 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
TSPAN3O60637 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.38■□□□□ 0.37
TSPAN3O60637 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN3O60637 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN3O60637 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TSPAN3O60637 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TSPAN3O60637 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TSPAN3O60637 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
TSPAN3O60637 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TSPAN3O60637 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TSPAN3O60637 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TSPAN3O60637 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TSPAN3O60637 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
TSPAN3O60637 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TSPAN3O60637 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TSPAN3O60637 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TSPAN3O60637 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TSPAN3O60637 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TSPAN3O60637 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TSPAN3O60637 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TSPAN3O60637 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms