Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.18■□□□□ 0.18
NDUFS4O43181 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFS4O43181 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFS4O43181 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFS4O43181 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NDUFS4O43181 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFS4O43181 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFS4O43181 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.18■□□□□ 0.18
NDUFS4O43181 CRYGEP-201ENST00000412192 528 ntBASIC16.18■□□□□ 0.18
NDUFS4O43181 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFS4O43181 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.18■□□□□ 0.18
NDUFS4O43181 AC107918.2-201ENST00000530817 355 ntBASIC16.18■□□□□ 0.18
NDUFS4O43181 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.18■□□□□ 0.18
NDUFS4O43181 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFS4O43181 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFS4O43181 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NDUFS4O43181 REXO1L3P-201ENST00000622202 1288 ntBASIC16.18■□□□□ 0.18
NDUFS4O43181 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFS4O43181 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.18■□□□□ 0.18
NDUFS4O43181 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFS4O43181 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.18■□□□□ 0.18
NDUFS4O43181 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFS4O43181 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
NDUFS4O43181 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFS4O43181 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFS4O43181 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFS4O43181 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NDUFS4O43181 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFS4O43181 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFS4O43181 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.18■□□□□ 0.18
NDUFS4O43181 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.18■□□□□ 0.18
NDUFS4O43181 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NDUFS4O43181 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFS4O43181 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFS4O43181 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFS4O43181 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFS4O43181 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NDUFS4O43181 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.18■□□□□ 0.18
NDUFS4O43181 AC129492.6-201ENST00000611383 1305 ntBASIC16.18■□□□□ 0.18
NDUFS4O43181 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFS4O43181 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFS4O43181 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFS4O43181 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
NDUFS4O43181 RNF216P1-203ENST00000404404 2427 ntBASIC16.17■□□□□ 0.18
NDUFS4O43181 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.17■□□□□ 0.18
NDUFS4O43181 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.17■□□□□ 0.18
NDUFS4O43181 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFS4O43181 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFS4O43181 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NDUFS4O43181 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFS4O43181 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.17■□□□□ 0.18
NDUFS4O43181 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NDUFS4O43181 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.17■□□□□ 0.18
NDUFS4O43181 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFS4O43181 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFS4O43181 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFS4O43181 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.17■□□□□ 0.18
NDUFS4O43181 AL022342.1-201ENST00000400363 863 ntBASIC16.17■□□□□ 0.18
NDUFS4O43181 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.17■□□□□ 0.18
NDUFS4O43181 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFS4O43181 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
NDUFS4O43181 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFS4O43181 VN2R19P-201ENST00000442399 1052 ntBASIC16.17■□□□□ 0.18
NDUFS4O43181 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.17■□□□□ 0.18
NDUFS4O43181 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.17■□□□□ 0.18
NDUFS4O43181 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.17■□□□□ 0.18
NDUFS4O43181 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFS4O43181 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.17■□□□□ 0.18
NDUFS4O43181 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFS4O43181 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
NDUFS4O43181 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.17■□□□□ 0.18
NDUFS4O43181 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFS4O43181 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFS4O43181 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFS4O43181 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFS4O43181 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFS4O43181 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NDUFS4O43181 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFS4O43181 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFS4O43181 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFS4O43181 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.17■□□□□ 0.18
NDUFS4O43181 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NDUFS4O43181 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.17■□□□□ 0.18
NDUFS4O43181 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS4O43181 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS4O43181 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NDUFS4O43181 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS4O43181 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS4O43181 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.16■□□□□ 0.18
NDUFS4O43181 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS4O43181 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS4O43181 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS4O43181 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS4O43181 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.16■□□□□ 0.18
NDUFS4O43181 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.16■□□□□ 0.18
NDUFS4O43181 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS4O43181 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS4O43181 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
NDUFS4O43181 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NDUFS4O43181 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms