Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GSC2O15499 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GSC2O15499 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GSC2O15499 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GSC2O15499 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
GSC2O15499 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GSC2O15499 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GSC2O15499 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GSC2O15499 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GSC2O15499 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
GSC2O15499 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GSC2O15499 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.29■□□□□ 0.2
GSC2O15499 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
GSC2O15499 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GSC2O15499 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GSC2O15499 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GSC2O15499 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GSC2O15499 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
GSC2O15499 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GSC2O15499 AC023157.3-201ENST00000619086 2088 ntBASIC16.28■□□□□ 0.2
GSC2O15499 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.28■□□□□ 0.2
GSC2O15499 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
GSC2O15499 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
GSC2O15499 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GSC2O15499 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
GSC2O15499 AC006449.6-201ENST00000612330 2296 ntBASIC16.28■□□□□ 0.2
GSC2O15499 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
GSC2O15499 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.28■□□□□ 0.2
GSC2O15499 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GSC2O15499 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GSC2O15499 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GSC2O15499 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GSC2O15499 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
GSC2O15499 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GSC2O15499 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.28■□□□□ 0.2
GSC2O15499 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GSC2O15499 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.28■□□□□ 0.2
GSC2O15499 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.28■□□□□ 0.2
GSC2O15499 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.28■□□□□ 0.2
GSC2O15499 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.28■□□□□ 0.2
GSC2O15499 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
GSC2O15499 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GSC2O15499 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GSC2O15499 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.28■□□□□ 0.2
GSC2O15499 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.28■□□□□ 0.2
GSC2O15499 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GSC2O15499 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GSC2O15499 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GSC2O15499 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.27■□□□□ 0.2
GSC2O15499 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
GSC2O15499 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
GSC2O15499 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
GSC2O15499 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.27■□□□□ 0.2
GSC2O15499 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
GSC2O15499 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GSC2O15499 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GSC2O15499 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GSC2O15499 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GSC2O15499 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GSC2O15499 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GSC2O15499 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
GSC2O15499 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GSC2O15499 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.27■□□□□ 0.2
GSC2O15499 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.27■□□□□ 0.2
GSC2O15499 NEK4P2-201ENST00000580004 1012 ntBASIC16.27■□□□□ 0.2
GSC2O15499 MIR4651-201ENST00000582622 73 ntBASIC16.27■□□□□ 0.2
GSC2O15499 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GSC2O15499 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GSC2O15499 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GSC2O15499 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GSC2O15499 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GSC2O15499 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.27■□□□□ 0.2
GSC2O15499 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GSC2O15499 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GSC2O15499 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.27■□□□□ 0.19
GSC2O15499 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
GSC2O15499 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.27■□□□□ 0.19
GSC2O15499 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GSC2O15499 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GSC2O15499 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
GSC2O15499 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
GSC2O15499 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
GSC2O15499 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
GSC2O15499 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.27■□□□□ 0.19
GSC2O15499 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
GSC2O15499 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GSC2O15499 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
GSC2O15499 AC002310.6-201ENST00000624451 1377 ntBASIC16.26■□□□□ 0.19
GSC2O15499 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GSC2O15499 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GSC2O15499 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GSC2O15499 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
GSC2O15499 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.26■□□□□ 0.19
GSC2O15499 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.26■□□□□ 0.19
GSC2O15499 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.26■□□□□ 0.19
GSC2O15499 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GSC2O15499 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.26■□□□□ 0.19
GSC2O15499 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.26■□□□□ 0.19
GSC2O15499 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
GSC2O15499 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms