Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
AP3B1O00203 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3B1O00203 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3B1O00203 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3B1O00203 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
AP3B1O00203 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3B1O00203 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP3B1O00203 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.09■□□□□ 0.33
AP3B1O00203 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3B1O00203 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3B1O00203 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3B1O00203 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3B1O00203 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3B1O00203 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3B1O00203 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
AP3B1O00203 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3B1O00203 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3B1O00203 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
AP3B1O00203 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP3B1O00203 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3B1O00203 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3B1O00203 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.09■□□□□ 0.33
AP3B1O00203 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.09■□□□□ 0.33
AP3B1O00203 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.09■□□□□ 0.33
AP3B1O00203 SART3-203ENST00000546611 1184 ntBASIC17.09■□□□□ 0.33
AP3B1O00203 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.09■□□□□ 0.33
AP3B1O00203 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.09■□□□□ 0.33
AP3B1O00203 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3B1O00203 GGTLC5P-201ENST00000617623 998 ntBASIC17.09■□□□□ 0.33
AP3B1O00203 AL805961.1-202ENST00000641562 540 ntBASIC17.09■□□□□ 0.33
AP3B1O00203 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.09■□□□□ 0.33
AP3B1O00203 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
AP3B1O00203 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
AP3B1O00203 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3B1O00203 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3B1O00203 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3B1O00203 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
AP3B1O00203 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3B1O00203 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3B1O00203 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3B1O00203 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
AP3B1O00203 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3B1O00203 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3B1O00203 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP3B1O00203 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.08■□□□□ 0.33
AP3B1O00203 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.08■□□□□ 0.33
AP3B1O00203 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
AP3B1O00203 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
AP3B1O00203 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
AP3B1O00203 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
AP3B1O00203 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP3B1O00203 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP3B1O00203 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP3B1O00203 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
AP3B1O00203 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP3B1O00203 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
AP3B1O00203 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
AP3B1O00203 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.08■□□□□ 0.32
AP3B1O00203 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
AP3B1O00203 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
AP3B1O00203 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.08■□□□□ 0.32
AP3B1O00203 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP3B1O00203 AC091167.2-201ENST00000579581 588 ntBASIC17.08■□□□□ 0.32
AP3B1O00203 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.08■□□□□ 0.32
AP3B1O00203 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP3B1O00203 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3B1O00203 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.07■□□□□ 0.32
AP3B1O00203 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3B1O00203 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.07■□□□□ 0.32
AP3B1O00203 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AP3B1O00203 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.07■□□□□ 0.32
AP3B1O00203 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AP3B1O00203 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3B1O00203 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
AP3B1O00203 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3B1O00203 NFIC-211ENST00000641145 8399 ntBASIC17.07■□□□□ 0.32
AP3B1O00203 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3B1O00203 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AP3B1O00203 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
AP3B1O00203 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AP3B1O00203 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
AP3B1O00203 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3B1O00203 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.07■□□□□ 0.32
AP3B1O00203 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AP3B1O00203 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.07■□□□□ 0.32
AP3B1O00203 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
AP3B1O00203 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3B1O00203 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
AP3B1O00203 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3B1O00203 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3B1O00203 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3B1O00203 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3B1O00203 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
AP3B1O00203 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AP3B1O00203 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3B1O00203 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AP3B1O00203 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.07■□□□□ 0.32
AP3B1O00203 PI4KAP1-204ENST00000612579 1703 ntBASIC17.07■□□□□ 0.32
AP3B1O00203 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
AP3B1O00203 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms