Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.1■□□□□ 0.33
TBC1D3BA6NDS4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 MIR943-201ENST00000401286 94 ntBASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 KLF2P3-201ENST00000451977 1087 ntBASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 SLC25A39P2-201ENST00000537614 270 ntBASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 AC026150.2-201ENST00000564693 1156 ntBASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 AC027307.2-201ENST00000591252 911 ntBASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 AC008267.7-201ENST00000624570 1194 ntBASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TBC1D3BA6NDS4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.08■□□□□ 0.33
TBC1D3BA6NDS4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.08■□□□□ 0.33
TBC1D3BA6NDS4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.08■□□□□ 0.33
TBC1D3BA6NDS4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
TBC1D3BA6NDS4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TBC1D3BA6NDS4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.08■□□□□ 0.33
TBC1D3BA6NDS4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TBC1D3BA6NDS4 AC016027.1-202ENST00000607927 1699 ntBASIC17.08■□□□□ 0.32
TBC1D3BA6NDS4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TBC1D3BA6NDS4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.08■□□□□ 0.32
TBC1D3BA6NDS4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TBC1D3BA6NDS4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TBC1D3BA6NDS4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TBC1D3BA6NDS4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TBC1D3BA6NDS4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.08■□□□□ 0.32
TBC1D3BA6NDS4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.08■□□□□ 0.32
TBC1D3BA6NDS4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TBC1D3BA6NDS4 SPDYE7P-202ENST00000420373 878 ntBASIC17.08■□□□□ 0.32
TBC1D3BA6NDS4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TBC1D3BA6NDS4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.08■□□□□ 0.32
TBC1D3BA6NDS4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.08■□□□□ 0.32
TBC1D3BA6NDS4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
TBC1D3BA6NDS4 AC051619.7-201ENST00000568314 623 ntBASIC17.08■□□□□ 0.32
TBC1D3BA6NDS4 CYP2A7P1-201ENST00000595391 815 ntBASIC17.08■□□□□ 0.32
TBC1D3BA6NDS4 AL390955.2-201ENST00000603032 514 ntBASIC17.08■□□□□ 0.32
TBC1D3BA6NDS4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.08■□□□□ 0.32
TBC1D3BA6NDS4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TBC1D3BA6NDS4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TBC1D3BA6NDS4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TBC1D3BA6NDS4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TBC1D3BA6NDS4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 AC008677.1-201ENST00000519230 1561 ntBASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3BA6NDS4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms