Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
PCDHGB1Q9Y5G3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
PCDHGB1Q9Y5G3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 COX5BP2-201ENST00000392354 334 ntBASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 MTCL1P1-201ENST00000446207 792 ntBASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 KRT18P56-201ENST00000507275 550 ntBASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 IGHV3-52-201ENST00000519770 353 ntBASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 AC022616.7-201ENST00000525383 220 ntBASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
PCDHGB1Q9Y5G3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 AC006058.4-201ENST00000624016 1670 ntBASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 AL645728.1-201ENST00000366221 2101 ntBASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 RASA4DP-201ENST00000460726 1199 ntBASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 GCSHP2-201ENST00000560971 527 ntBASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PCDHGB1Q9Y5G3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms