Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB3IPQ96QF0 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB3IPQ96QF0 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB3IPQ96QF0 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.56■□□□□ 0.24
RAB3IPQ96QF0 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB3IPQ96QF0 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB3IPQ96QF0 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB3IPQ96QF0 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB3IPQ96QF0 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB3IPQ96QF0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 AC010491.1-201ENST00000563101 2797 ntBASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 KRT17P3-201ENST00000420566 1262 ntBASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 AL023875.1-201ENST00000640777 796 ntBASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 TCAF2P1-201ENST00000291129 2421 ntBASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 AP005117.1-202ENST00000581724 1908 ntBASIC16.55■□□□□ 0.24
RAB3IPQ96QF0 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 TUBB8P12-201ENST00000308911 1335 ntBASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 TUBB7P-202ENST00000428444 1305 ntBASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 TUBB8P7-204ENST00000567960 1332 ntBASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 MFAP1P1-201ENST00000442257 1255 ntBASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAB3IPQ96QF0 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms