Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 SLC25A1P1-201ENST00000528351 927 ntBASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 AC091167.2-201ENST00000579581 588 ntBASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC148Q8NFR7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 AC005412.3-201ENST00000580309 715 ntBASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 AC105020.1-201ENST00000435356 2205 ntBASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC148Q8NFR7 AC005915.1-201ENST00000624912 2018 ntBASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 AC106730.1-201ENST00000566722 1090 ntBASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 PCDHB17P-201ENST00000539533 2393 ntBASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC148Q8NFR7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms