Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 LINC02560-201ENST00000596379 459 ntBASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 MIR6080-201ENST00000617359 66 ntBASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 AC008267.7-201ENST00000624570 1194 ntBASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 AC084121.4-201ENST00000641598 221 ntBASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 AF228730.8-201ENST00000642140 221 ntBASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 AC131009.4-201ENST00000624048 1740 ntBASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC149Q6ZUS6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 AL138688.1-201ENST00000624851 1594 ntBASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 MPDU1-223ENST00000582151 728 ntBASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC149Q6ZUS6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC149Q6ZUS6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.71■□□□□ 0.42
CCDC149Q6ZUS6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC149Q6ZUS6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC149Q6ZUS6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CCDC149Q6ZUS6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC149Q6ZUS6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC149Q6ZUS6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
CCDC149Q6ZUS6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC149Q6ZUS6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CCDC149Q6ZUS6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
CCDC149Q6ZUS6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC149Q6ZUS6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC149Q6ZUS6 GAPDHP21-201ENST00000450301 1010 ntBASIC17.7■□□□□ 0.42
CCDC149Q6ZUS6 AC069120.2-201ENST00000524091 540 ntBASIC17.7■□□□□ 0.42
CCDC149Q6ZUS6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.7■□□□□ 0.42
CCDC149Q6ZUS6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.7■□□□□ 0.42
CCDC149Q6ZUS6 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC149Q6ZUS6 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.7■□□□□ 0.42
CCDC149Q6ZUS6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC149Q6ZUS6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC149Q6ZUS6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC149Q6ZUS6 AL390961.4-201ENST00000623958 2535 ntBASIC17.7■□□□□ 0.42
CCDC149Q6ZUS6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC149Q6ZUS6 KRT8P49-201ENST00000604166 1432 ntBASIC17.7■□□□□ 0.42
CCDC149Q6ZUS6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CCDC149Q6ZUS6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CCDC149Q6ZUS6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC149Q6ZUS6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC149Q6ZUS6 AC008764.6-201ENST00000595909 2069 ntBASIC17.7■□□□□ 0.42
CCDC149Q6ZUS6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CCDC149Q6ZUS6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CCDC149Q6ZUS6 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CCDC149Q6ZUS6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
CCDC149Q6ZUS6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC149Q6ZUS6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC149Q6ZUS6 AC007613.1-201ENST00000572811 2597 ntBASIC17.69■□□□□ 0.42
CCDC149Q6ZUS6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC149Q6ZUS6 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC149Q6ZUS6 PKD1P1-201ENST00000458669 6805 ntBASIC17.69■□□□□ 0.42
CCDC149Q6ZUS6 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC149Q6ZUS6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC149Q6ZUS6 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC149Q6ZUS6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
CCDC149Q6ZUS6 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC149Q6ZUS6 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC149Q6ZUS6 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms