Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
MS4A1P11836 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MS4A1P11836 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MS4A1P11836 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MS4A1P11836 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC21.76■■□□□ 1.07
MS4A1P11836 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.76■■□□□ 1.07
MS4A1P11836 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
MS4A1P11836 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.76■■□□□ 1.07
MS4A1P11836 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC21.76■■□□□ 1.07
MS4A1P11836 DUX4L17-201ENST00000557360 1267 ntBASIC21.76■■□□□ 1.07
MS4A1P11836 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC21.76■■□□□ 1.07
MS4A1P11836 TERC-201ENST00000602385 541 ntBASIC21.76■■□□□ 1.07
MS4A1P11836 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC21.76■■□□□ 1.07
MS4A1P11836 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC21.76■■□□□ 1.07
MS4A1P11836 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MS4A1P11836 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MS4A1P11836 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MS4A1P11836 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MS4A1P11836 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21.76■■□□□ 1.07
MS4A1P11836 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
MS4A1P11836 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC21.76■■□□□ 1.07
MS4A1P11836 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
MS4A1P11836 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MS4A1P11836 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MS4A1P11836 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MS4A1P11836 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MS4A1P11836 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC21.75■■□□□ 1.07
MS4A1P11836 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC21.75■■□□□ 1.07
MS4A1P11836 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
MS4A1P11836 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
MS4A1P11836 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
MS4A1P11836 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
MS4A1P11836 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
MS4A1P11836 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
MS4A1P11836 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MS4A1P11836 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
MS4A1P11836 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MS4A1P11836 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
MS4A1P11836 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.75■■□□□ 1.07
MS4A1P11836 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.75■■□□□ 1.07
MS4A1P11836 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.75■■□□□ 1.07
MS4A1P11836 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.75■■□□□ 1.07
MS4A1P11836 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MS4A1P11836 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MS4A1P11836 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC21.75■■□□□ 1.07
MS4A1P11836 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MS4A1P11836 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
MS4A1P11836 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC21.75■■□□□ 1.07
MS4A1P11836 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC21.75■■□□□ 1.07
MS4A1P11836 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MS4A1P11836 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MS4A1P11836 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.74■■□□□ 1.07
MS4A1P11836 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC21.74■■□□□ 1.07
MS4A1P11836 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MS4A1P11836 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MS4A1P11836 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC21.74■■□□□ 1.07
MS4A1P11836 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
MS4A1P11836 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MS4A1P11836 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MS4A1P11836 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MS4A1P11836 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC21.74■■□□□ 1.07
MS4A1P11836 SAPCD2P3-201ENST00000455031 850 ntBASIC21.74■■□□□ 1.07
MS4A1P11836 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.74■■□□□ 1.07
MS4A1P11836 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.74■■□□□ 1.07
MS4A1P11836 ABBA01031661.1-201ENST00000634362 1253 ntBASIC21.74■■□□□ 1.07
MS4A1P11836 FOS-208ENST00000555686 1496 ntTSL 2 BASIC21.74■■□□□ 1.07
MS4A1P11836 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MS4A1P11836 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MS4A1P11836 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
MS4A1P11836 AC243591.1-201ENST00000452967 1364 ntBASIC21.74■■□□□ 1.07
MS4A1P11836 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
MS4A1P11836 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MS4A1P11836 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
MS4A1P11836 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MS4A1P11836 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MS4A1P11836 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MS4A1P11836 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MS4A1P11836 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
MS4A1P11836 AC007950.2-201ENST00000615045 2347 ntBASIC21.73■■□□□ 1.07
MS4A1P11836 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
MS4A1P11836 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MS4A1P11836 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC21.73■■□□□ 1.07
MS4A1P11836 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC21.73■■□□□ 1.07
MS4A1P11836 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MS4A1P11836 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MS4A1P11836 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC21.73■■□□□ 1.07
MS4A1P11836 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21.73■■□□□ 1.07
MS4A1P11836 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.73■■□□□ 1.07
MS4A1P11836 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MS4A1P11836 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC21.73■■□□□ 1.07
MS4A1P11836 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC21.73■■□□□ 1.07
MS4A1P11836 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.73■■□□□ 1.07
MS4A1P11836 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
MS4A1P11836 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.73■■□□□ 1.07
MS4A1P11836 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.73■■□□□ 1.07
MS4A1P11836 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.73■■□□□ 1.07
MS4A1P11836 MTDHP4-201ENST00000600287 670 ntBASIC21.73■■□□□ 1.07
MS4A1P11836 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MS4A1P11836 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MS4A1P11836 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms