Protein–RNA interactions for Protein: O43325

LYRM1, LYR motif-containing protein 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1O43325 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.58□□□□□ -0.07
LYRM1O43325 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LYRM1O43325 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LYRM1O43325 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYRM1O43325 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYRM1O43325 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYRM1O43325 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
LYRM1O43325 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LYRM1O43325 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LYRM1O43325 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LYRM1O43325 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYRM1O43325 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.58□□□□□ -0.08
LYRM1O43325 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYRM1O43325 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
LYRM1O43325 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LYRM1O43325 AC133681.1-201ENST00000465482 601 ntBASIC14.58□□□□□ -0.08
LYRM1O43325 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.58□□□□□ -0.08
LYRM1O43325 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.58□□□□□ -0.08
LYRM1O43325 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC14.58□□□□□ -0.08
LYRM1O43325 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.58□□□□□ -0.08
LYRM1O43325 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
LYRM1O43325 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYRM1O43325 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYRM1O43325 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
LYRM1O43325 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYRM1O43325 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYRM1O43325 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LYRM1O43325 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LYRM1O43325 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYRM1O43325 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYRM1O43325 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYRM1O43325 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYRM1O43325 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYRM1O43325 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.58□□□□□ -0.08
LYRM1O43325 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LYRM1O43325 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LYRM1O43325 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYRM1O43325 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LYRM1O43325 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYRM1O43325 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYRM1O43325 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYRM1O43325 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYRM1O43325 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYRM1O43325 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYRM1O43325 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYRM1O43325 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYRM1O43325 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LYRM1O43325 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
LYRM1O43325 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYRM1O43325 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LYRM1O43325 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYRM1O43325 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYRM1O43325 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LYRM1O43325 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LYRM1O43325 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.57□□□□□ -0.08
LYRM1O43325 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LYRM1O43325 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYRM1O43325 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYRM1O43325 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYRM1O43325 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.57□□□□□ -0.08
LYRM1O43325 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.57□□□□□ -0.08
LYRM1O43325 AL138781.1-201ENST00000566567 1274 ntBASIC14.57□□□□□ -0.08
LYRM1O43325 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC14.57□□□□□ -0.08
LYRM1O43325 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14.57□□□□□ -0.08
LYRM1O43325 DGCR10-201ENST00000609839 495 ntBASIC14.57□□□□□ -0.08
LYRM1O43325 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYRM1O43325 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.57□□□□□ -0.08
LYRM1O43325 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
LYRM1O43325 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYRM1O43325 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LYRM1O43325 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LYRM1O43325 AL365209.1-201ENST00000624418 6473 ntBASIC14.57□□□□□ -0.08
LYRM1O43325 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.57□□□□□ -0.08
LYRM1O43325 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.57□□□□□ -0.08
LYRM1O43325 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LYRM1O43325 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYRM1O43325 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LYRM1O43325 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.56□□□□□ -0.08
LYRM1O43325 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYRM1O43325 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYRM1O43325 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.56□□□□□ -0.08
LYRM1O43325 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.56□□□□□ -0.08
LYRM1O43325 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.56□□□□□ -0.08
LYRM1O43325 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYRM1O43325 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYRM1O43325 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
LYRM1O43325 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LYRM1O43325 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LYRM1O43325 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYRM1O43325 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LYRM1O43325 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYRM1O43325 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.56□□□□□ -0.08
LYRM1O43325 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.56□□□□□ -0.08
LYRM1O43325 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.56□□□□□ -0.08
LYRM1O43325 AC006970.2-201ENST00000450065 779 ntBASIC14.56□□□□□ -0.08
LYRM1O43325 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC14.56□□□□□ -0.08
LYRM1O43325 AC112698.1-201ENST00000510299 916 ntBASIC14.56□□□□□ -0.08
LYRM1O43325 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.56□□□□□ -0.08
LYRM1O43325 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LYRM1O43325 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms