Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PHGDHO43175 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.88■□□□□ 0.29
PHGDHO43175 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
PHGDHO43175 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
PHGDHO43175 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.88■□□□□ 0.29
PHGDHO43175 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHGDHO43175 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHGDHO43175 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PHGDHO43175 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHGDHO43175 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHGDHO43175 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHGDHO43175 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHGDHO43175 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.88■□□□□ 0.29
PHGDHO43175 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHGDHO43175 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHGDHO43175 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHGDHO43175 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHGDHO43175 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHGDHO43175 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.88■□□□□ 0.29
PHGDHO43175 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PHGDHO43175 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PHGDHO43175 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.88■□□□□ 0.29
PHGDHO43175 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PHGDHO43175 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHGDHO43175 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.87■□□□□ 0.29
PHGDHO43175 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.87■□□□□ 0.29
PHGDHO43175 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PHGDHO43175 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PHGDHO43175 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PHGDHO43175 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PHGDHO43175 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PHGDHO43175 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.87■□□□□ 0.29
PHGDHO43175 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.87■□□□□ 0.29
PHGDHO43175 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
PHGDHO43175 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
PHGDHO43175 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.87■□□□□ 0.29
PHGDHO43175 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.87■□□□□ 0.29
PHGDHO43175 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PHGDHO43175 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PHGDHO43175 AC132008.2-207ENST00000454517 770 ntBASIC16.87■□□□□ 0.29
PHGDHO43175 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.87■□□□□ 0.29
PHGDHO43175 AP002490.2-201ENST00000524791 560 ntBASIC16.87■□□□□ 0.29
PHGDHO43175 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.87■□□□□ 0.29
PHGDHO43175 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.87■□□□□ 0.29
PHGDHO43175 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.87■□□□□ 0.29
PHGDHO43175 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PHGDHO43175 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.87■□□□□ 0.29
PHGDHO43175 AL445228.2-201ENST00000605589 952 ntBASIC16.87■□□□□ 0.29
PHGDHO43175 AC091076.1-201ENST00000610741 619 ntBASIC16.87■□□□□ 0.29
PHGDHO43175 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHGDHO43175 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PHGDHO43175 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.87■□□□□ 0.29
PHGDHO43175 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHGDHO43175 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PHGDHO43175 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.87■□□□□ 0.29
PHGDHO43175 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHGDHO43175 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PHGDHO43175 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHGDHO43175 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PHGDHO43175 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHGDHO43175 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHGDHO43175 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHGDHO43175 ALOX12P2-203ENST00000570921 1945 ntBASIC16.86■□□□□ 0.29
PHGDHO43175 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PHGDHO43175 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHGDHO43175 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHGDHO43175 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHGDHO43175 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.86■□□□□ 0.29
PHGDHO43175 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.86■□□□□ 0.29
PHGDHO43175 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHGDHO43175 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PHGDHO43175 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
PHGDHO43175 AP002414.1-201ENST00000391405 1147 ntBASIC16.86■□□□□ 0.29
PHGDHO43175 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PHGDHO43175 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PHGDHO43175 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.86■□□□□ 0.29
PHGDHO43175 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.86■□□□□ 0.29
PHGDHO43175 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.86■□□□□ 0.29
PHGDHO43175 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.86■□□□□ 0.29
PHGDHO43175 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHGDHO43175 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHGDHO43175 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PHGDHO43175 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PHGDHO43175 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PHGDHO43175 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHGDHO43175 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PHGDHO43175 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHGDHO43175 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHGDHO43175 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PHGDHO43175 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHGDHO43175 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHGDHO43175 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.86■□□□□ 0.29
PHGDHO43175 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHGDHO43175 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PHGDHO43175 AP005117.1-201ENST00000584346 1413 ntBASIC16.86■□□□□ 0.29
PHGDHO43175 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHGDHO43175 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHGDHO43175 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PHGDHO43175 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PHGDHO43175 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms