Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
SURF4O15260 AP005901.3-202ENST00000581653 237 ntBASIC15.32■□□□□ 0.04
SURF4O15260 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SURF4O15260 AC093458.2-201ENST00000623150 629 ntBASIC15.32■□□□□ 0.04
SURF4O15260 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.32■□□□□ 0.04
SURF4O15260 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SURF4O15260 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.32■□□□□ 0.04
SURF4O15260 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SURF4O15260 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.32■□□□□ 0.04
SURF4O15260 ME2P1-201ENST00000426028 1970 ntBASIC15.32■□□□□ 0.04
SURF4O15260 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.32■□□□□ 0.04
SURF4O15260 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.32■□□□□ 0.04
SURF4O15260 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SURF4O15260 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SURF4O15260 AC016734.2-201ENST00000624325 1377 ntBASIC15.32■□□□□ 0.04
SURF4O15260 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
SURF4O15260 NFIC-211ENST00000641145 8399 ntBASIC15.32■□□□□ 0.04
SURF4O15260 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SURF4O15260 TP73-AS1-210ENST00000637775 1455 ntBASIC15.32■□□□□ 0.04
SURF4O15260 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SURF4O15260 PMPCAP1-201ENST00000508114 1576 ntBASIC15.32■□□□□ 0.04
SURF4O15260 AC006538.1-201ENST00000567905 1585 ntBASIC15.32■□□□□ 0.04
SURF4O15260 MTHFR-217ENST00000641820 1569 ntBASIC15.32■□□□□ 0.04
SURF4O15260 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.32■□□□□ 0.04
SURF4O15260 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SURF4O15260 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.32■□□□□ 0.04
SURF4O15260 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.32■□□□□ 0.04
SURF4O15260 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.32■□□□□ 0.04
SURF4O15260 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SURF4O15260 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SURF4O15260 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SURF4O15260 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SURF4O15260 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SURF4O15260 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
SURF4O15260 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SURF4O15260 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
SURF4O15260 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SURF4O15260 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SURF4O15260 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.31■□□□□ 0.04
SURF4O15260 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SURF4O15260 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SURF4O15260 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
SURF4O15260 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SURF4O15260 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.31■□□□□ 0.04
SURF4O15260 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.31■□□□□ 0.04
SURF4O15260 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.31■□□□□ 0.04
SURF4O15260 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SURF4O15260 KRT18P1-202ENST00000452408 1331 ntBASIC15.31■□□□□ 0.04
SURF4O15260 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.31■□□□□ 0.04
SURF4O15260 AL021920.2-201ENST00000624828 1351 ntBASIC15.31■□□□□ 0.04
SURF4O15260 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.31■□□□□ 0.04
SURF4O15260 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SURF4O15260 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SURF4O15260 AC148477.5-201ENST00000625164 1645 ntBASIC15.31■□□□□ 0.04
SURF4O15260 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SURF4O15260 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SURF4O15260 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SURF4O15260 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.31■□□□□ 0.04
SURF4O15260 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SURF4O15260 AL356309.3-201ENST00000624132 1934 ntBASIC15.31■□□□□ 0.04
SURF4O15260 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SURF4O15260 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.31■□□□□ 0.04
SURF4O15260 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SURF4O15260 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.31■□□□□ 0.04
SURF4O15260 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SURF4O15260 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SURF4O15260 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.31■□□□□ 0.04
SURF4O15260 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SURF4O15260 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SURF4O15260 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SURF4O15260 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.3■□□□□ 0.04
SURF4O15260 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SURF4O15260 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.3■□□□□ 0.04
SURF4O15260 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SURF4O15260 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SURF4O15260 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SURF4O15260 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SURF4O15260 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SURF4O15260 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SURF4O15260 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SURF4O15260 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SURF4O15260 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SURF4O15260 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SURF4O15260 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SURF4O15260 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.3■□□□□ 0.04
SURF4O15260 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SURF4O15260 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SURF4O15260 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SURF4O15260 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SURF4O15260 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SURF4O15260 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.3■□□□□ 0.04
SURF4O15260 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.3■□□□□ 0.04
SURF4O15260 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.3■□□□□ 0.04
SURF4O15260 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SURF4O15260 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.3■□□□□ 0.04
SURF4O15260 SIGLEC30P-201ENST00000455569 941 ntBASIC15.3■□□□□ 0.04
SURF4O15260 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.3■□□□□ 0.04
SURF4O15260 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SURF4O15260 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.3■□□□□ 0.04
SURF4O15260 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms