Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 LIN28AP1-201ENST00000429574 405 ntBASIC14.51□□□□□ -0.09
TMEM235A6NFC5 AC103564.2-201ENST00000432853 1299 ntBASIC14.51□□□□□ -0.09
TMEM235A6NFC5 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 ATP5G1P1-201ENST00000448724 379 ntBASIC14.51□□□□□ -0.09
TMEM235A6NFC5 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 RNF126P1-202ENST00000569893 925 ntBASIC14.51□□□□□ -0.09
TMEM235A6NFC5 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 AC011558.1-201ENST00000623459 338 ntBASIC14.51□□□□□ -0.09
TMEM235A6NFC5 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 AC009336.1-201ENST00000608941 1553 ntBASIC14.51□□□□□ -0.09
TMEM235A6NFC5 AC005052.1-201ENST00000625181 2492 ntBASIC14.51□□□□□ -0.09
TMEM235A6NFC5 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 AC125634.1-201ENST00000438758 1403 ntBASIC14.5□□□□□ -0.09
TMEM235A6NFC5 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 HBZP1-201ENST00000354915 429 ntBASIC14.5□□□□□ -0.09
TMEM235A6NFC5 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 VENTXP5-201ENST00000523979 775 ntBASIC14.5□□□□□ -0.09
TMEM235A6NFC5 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.5□□□□□ -0.09
TMEM235A6NFC5 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms