Protein–RNA interactions for Protein: A2A288

ZC3H12D, Probable ribonuclease ZC3H12D, humanhuman

Known RBP Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12DA2A288 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZC3H12DA2A288 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
ZC3H12DA2A288 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZC3H12DA2A288 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZC3H12DA2A288 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZC3H12DA2A288 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZC3H12DA2A288 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZC3H12DA2A288 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.51■□□□□ 0.07
ZC3H12DA2A288 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
ZC3H12DA2A288 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZC3H12DA2A288 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
ZC3H12DA2A288 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.51■□□□□ 0.07
ZC3H12DA2A288 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZC3H12DA2A288 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 AL590787.1-201ENST00000568856 1315 ntBASIC15.5■□□□□ 0.07
ZC3H12DA2A288 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 AL450487.1-201ENST00000426799 995 ntBASIC15.5■□□□□ 0.07
ZC3H12DA2A288 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 AC124947.2-201ENST00000547118 1133 ntBASIC15.5■□□□□ 0.07
ZC3H12DA2A288 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.5■□□□□ 0.07
ZC3H12DA2A288 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ZC3H12DA2A288 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.49■□□□□ 0.07
ZC3H12DA2A288 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.49■□□□□ 0.07
ZC3H12DA2A288 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 AC079781.3-201ENST00000449110 356 ntBASIC15.49■□□□□ 0.07
ZC3H12DA2A288 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 AL589182.2-201ENST00000619332 1049 ntBASIC15.49■□□□□ 0.07
ZC3H12DA2A288 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.49■□□□□ 0.07
ZC3H12DA2A288 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.48■□□□□ 0.07
ZC3H12DA2A288 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
ZC3H12DA2A288 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ZC3H12DA2A288 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms