Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 PRORSD1P-202ENST00000563365 2154 ntBASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 AC002310.6-201ENST00000624451 1377 ntBASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 KRT18P3-201ENST00000451602 1288 ntBASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 AC108751.1-201ENST00000490852 363 ntBASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 SLC25A6P2-201ENST00000497974 877 ntBASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 AC105020.1-201ENST00000435356 2205 ntBASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 KRT8P49-201ENST00000604166 1432 ntBASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 AD000864.1-201ENST00000624076 2295 ntBASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.41■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 AC005915.1-201ENST00000624912 2018 ntBASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 MRPL20P1-201ENST00000400819 433 ntBASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 AC108073.2-201ENST00000464002 357 ntBASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 REXO1L3P-201ENST00000622202 1288 ntBASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TNFSF12-TNFSF13A0A0A6YY99 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms