Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 AL157888.1-201ENST00000631930 593 ntBASIC13.32□□□□□ -0.28
MBD3L1Q8WWY6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L1Q8WWY6 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L1Q8WWY6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L1Q8WWY6 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L1Q8WWY6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L1Q8WWY6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L1Q8WWY6 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L1Q8WWY6 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L1Q8WWY6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L1Q8WWY6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.32□□□□□ -0.28
MBD3L1Q8WWY6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L1Q8WWY6 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L1Q8WWY6 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L1Q8WWY6 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L1Q8WWY6 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
MBD3L1Q8WWY6 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.32□□□□□ -0.28
MBD3L1Q8WWY6 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L1Q8WWY6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.32□□□□□ -0.28
MBD3L1Q8WWY6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.32□□□□□ -0.28
MBD3L1Q8WWY6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.32□□□□□ -0.28
MBD3L1Q8WWY6 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
MBD3L1Q8WWY6 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MBD3L1Q8WWY6 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 AC007663.1-201ENST00000438948 1240 ntBASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 AC010460.3-201ENST00000511359 1579 ntBASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.31□□□□□ -0.28
MBD3L1Q8WWY6 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
MBD3L1Q8WWY6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L1Q8WWY6 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L1Q8WWY6 GGT4P-201ENST00000623672 1708 ntBASIC13.3□□□□□ -0.28
MBD3L1Q8WWY6 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.3□□□□□ -0.28
MBD3L1Q8WWY6 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L1Q8WWY6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L1Q8WWY6 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
MBD3L1Q8WWY6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
MBD3L1Q8WWY6 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L1Q8WWY6 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
MBD3L1Q8WWY6 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.3□□□□□ -0.28
MBD3L1Q8WWY6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L1Q8WWY6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L1Q8WWY6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L1Q8WWY6 FUT8-AS1-201ENST00000621019 1521 ntBASIC13.3□□□□□ -0.28
MBD3L1Q8WWY6 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L1Q8WWY6 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L1Q8WWY6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L1Q8WWY6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L1Q8WWY6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L1Q8WWY6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
MBD3L1Q8WWY6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L1Q8WWY6 MTCL1P1-201ENST00000446207 792 ntBASIC13.3□□□□□ -0.28
MBD3L1Q8WWY6 GXYLT1P6-201ENST00000456472 1187 ntBASIC13.3□□□□□ -0.28
MBD3L1Q8WWY6 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MBD3L1Q8WWY6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms