Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCER1Q8TC90 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC25.34■■□□□ 1.65
CCER1Q8TC90 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCER1Q8TC90 BANP-204ENST00000393208 2283 ntTSL 2 BASIC25.34■■□□□ 1.65
CCER1Q8TC90 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
CCER1Q8TC90 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCER1Q8TC90 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CCER1Q8TC90 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCER1Q8TC90 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC25.34■■□□□ 1.65
CCER1Q8TC90 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CCER1Q8TC90 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCER1Q8TC90 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CCER1Q8TC90 AL020989.1-201ENST00000422979 469 ntBASIC25.34■■□□□ 1.65
CCER1Q8TC90 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC25.34■■□□□ 1.65
CCER1Q8TC90 DUX4L17-201ENST00000557360 1267 ntBASIC25.34■■□□□ 1.65
CCER1Q8TC90 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
CCER1Q8TC90 AP000867.4-201ENST00000641616 219 ntBASIC25.34■■□□□ 1.65
CCER1Q8TC90 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
CCER1Q8TC90 AC097637.2-201ENST00000624096 1997 ntBASIC25.34■■□□□ 1.65
CCER1Q8TC90 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCER1Q8TC90 CYP2T1P-202ENST00000641596 2535 ntBASIC25.34■■□□□ 1.65
CCER1Q8TC90 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CCER1Q8TC90 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCER1Q8TC90 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCER1Q8TC90 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC25.34■■□□□ 1.65
CCER1Q8TC90 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
CCER1Q8TC90 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
CCER1Q8TC90 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCER1Q8TC90 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCER1Q8TC90 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC25.33■■□□□ 1.65
CCER1Q8TC90 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCER1Q8TC90 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
CCER1Q8TC90 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC25.33■■□□□ 1.65
CCER1Q8TC90 PCED1CP-201ENST00000419887 785 ntBASIC25.33■■□□□ 1.65
CCER1Q8TC90 MPI-205ENST00000562606 1052 ntTSL 3 BASIC25.33■■□□□ 1.65
CCER1Q8TC90 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC25.33■■□□□ 1.65
CCER1Q8TC90 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC25.33■■□□□ 1.65
CCER1Q8TC90 AC132872.4-202ENST00000622924 2756 ntBASIC25.33■■□□□ 1.65
CCER1Q8TC90 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCER1Q8TC90 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCER1Q8TC90 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
CCER1Q8TC90 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC25.33■■□□□ 1.65
CCER1Q8TC90 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
CCER1Q8TC90 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
CCER1Q8TC90 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.64
CCER1Q8TC90 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC25.32■■□□□ 1.64
CCER1Q8TC90 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC25.32■■□□□ 1.64
CCER1Q8TC90 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC25.32■■□□□ 1.64
CCER1Q8TC90 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCER1Q8TC90 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCER1Q8TC90 AMT-206ENST00000458307 1860 ntTSL 2 BASIC25.32■■□□□ 1.64
CCER1Q8TC90 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC25.32■■□□□ 1.64
CCER1Q8TC90 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC25.32■■□□□ 1.64
CCER1Q8TC90 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC25.32■■□□□ 1.64
CCER1Q8TC90 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC25.32■■□□□ 1.64
CCER1Q8TC90 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CCER1Q8TC90 SPDYE21P-201ENST00000413323 827 ntBASIC25.32■■□□□ 1.64
CCER1Q8TC90 ACTG1P4-201ENST00000425123 1122 ntBASIC25.32■■□□□ 1.64
CCER1Q8TC90 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCER1Q8TC90 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC25.32■■□□□ 1.64
CCER1Q8TC90 NME3-204ENST00000563498 920 ntTSL 2 BASIC25.32■■□□□ 1.64
CCER1Q8TC90 AC074051.2-201ENST00000565115 352 ntBASIC25.32■■□□□ 1.64
CCER1Q8TC90 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CCER1Q8TC90 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCER1Q8TC90 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CCER1Q8TC90 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCER1Q8TC90 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC25.32■■□□□ 1.64
CCER1Q8TC90 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC25.32■■□□□ 1.64
CCER1Q8TC90 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC25.32■■□□□ 1.64
CCER1Q8TC90 HNRNPRP1-201ENST00000453465 1695 ntBASIC25.32■■□□□ 1.64
CCER1Q8TC90 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
CCER1Q8TC90 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCER1Q8TC90 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCER1Q8TC90 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCER1Q8TC90 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCER1Q8TC90 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CCER1Q8TC90 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
CCER1Q8TC90 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC25.31■■□□□ 1.64
CCER1Q8TC90 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CCER1Q8TC90 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCER1Q8TC90 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
CCER1Q8TC90 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CCER1Q8TC90 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCER1Q8TC90 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCER1Q8TC90 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CCER1Q8TC90 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CCER1Q8TC90 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
CCER1Q8TC90 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC25.31■■□□□ 1.64
CCER1Q8TC90 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC25.31■■□□□ 1.64
CCER1Q8TC90 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC25.31■■□□□ 1.64
CCER1Q8TC90 AC114341.1-201ENST00000618070 349 ntBASIC25.31■■□□□ 1.64
CCER1Q8TC90 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCER1Q8TC90 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCER1Q8TC90 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
CCER1Q8TC90 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCER1Q8TC90 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC25.31■■□□□ 1.64
CCER1Q8TC90 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCER1Q8TC90 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CCER1Q8TC90 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CCER1Q8TC90 AC005052.1-201ENST00000625181 2492 ntBASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms