Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 FDX1P1-201ENST00000449115 551 ntBASIC14.85□□□□□ -0.03
CPEB3Q8NE35 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 AC092910.1-201ENST00000482027 1129 ntBASIC14.85□□□□□ -0.03
CPEB3Q8NE35 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 MIR1199-201ENST00000621445 119 ntBASIC14.85□□□□□ -0.03
CPEB3Q8NE35 AC116407.3-201ENST00000623905 1129 ntBASIC14.85□□□□□ -0.03
CPEB3Q8NE35 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPEB3Q8NE35 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 MST1L-201ENST00000442552 2185 ntBASIC14.84□□□□□ -0.03
CPEB3Q8NE35 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 AC099398.1-201ENST00000567919 2776 ntBASIC14.84□□□□□ -0.03
CPEB3Q8NE35 AC106886.4-201ENST00000623557 2502 ntBASIC14.84□□□□□ -0.03
CPEB3Q8NE35 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 AC117500.6-201ENST00000624871 588 ntBASIC14.84□□□□□ -0.03
CPEB3Q8NE35 AF228730.7-201ENST00000641842 219 ntBASIC14.84□□□□□ -0.03
CPEB3Q8NE35 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 PRORSD1P-202ENST00000563365 2154 ntBASIC14.84□□□□□ -0.03
CPEB3Q8NE35 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CPEB3Q8NE35 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.03
CPEB3Q8NE35 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.83□□□□□ -0.03
CPEB3Q8NE35 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.83□□□□□ -0.03
CPEB3Q8NE35 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CPEB3Q8NE35 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.83□□□□□ -0.03
CPEB3Q8NE35 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.83□□□□□ -0.03
CPEB3Q8NE35 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CPEB3Q8NE35 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPEB3Q8NE35 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CPEB3Q8NE35 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms