Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
RP1L1Q8IWN7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RP1L1Q8IWN7 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 AC084121.4-201ENST00000641598 221 ntBASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 AF228730.8-201ENST00000642140 221 ntBASIC15.33■□□□□ 0.04
RP1L1Q8IWN7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 AC046185.3-201ENST00000623228 1824 ntBASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 TSSK5P-201ENST00000423978 907 ntBASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.32■□□□□ 0.04
RP1L1Q8IWN7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 AC026150.2-201ENST00000564693 1156 ntBASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 AC009113.1-201ENST00000570267 2443 ntBASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms