Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC00242Q5T6M2 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 AC003669.1-201ENST00000334569 611 ntBASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 HLA-J-202ENST00000469281 1241 ntBASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 VENTXP5-201ENST00000523979 775 ntBASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 AC139887.4-201ENST00000607877 719 ntBASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 WDR6-223ENST00000627177 207 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 AC103702.1-201ENST00000548801 2630 ntBASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 LGALS8-AS1-201ENST00000487567 1457 ntBASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC11.62□□□□□ -0.55
LINC00242Q5T6M2 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 BANP-201ENST00000286122 2368 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms