Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.37□□□□□ -0.27
CCL20P78556 AC023908.3-201ENST00000564211 3047 ntBASIC13.37□□□□□ -0.27
CCL20P78556 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.37□□□□□ -0.27
CCL20P78556 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.37□□□□□ -0.27
CCL20P78556 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL20P78556 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL20P78556 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
CCL20P78556 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL20P78556 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL20P78556 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL20P78556 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL20P78556 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CCL20P78556 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL20P78556 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL20P78556 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCL20P78556 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC13.37□□□□□ -0.27
CCL20P78556 AC026271.2-201ENST00000428091 497 ntBASIC13.37□□□□□ -0.27
CCL20P78556 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCL20P78556 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC13.37□□□□□ -0.27
CCL20P78556 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCL20P78556 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC13.37□□□□□ -0.27
CCL20P78556 DGCR10-201ENST00000609839 495 ntBASIC13.37□□□□□ -0.27
CCL20P78556 GXYLT1P5-201ENST00000614548 1189 ntBASIC13.37□□□□□ -0.27
CCL20P78556 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.37□□□□□ -0.27
CCL20P78556 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCL20P78556 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
CCL20P78556 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CCL20P78556 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCL20P78556 CICP4-201ENST00000447359 2812 ntBASIC13.37□□□□□ -0.27
CCL20P78556 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.37□□□□□ -0.27
CCL20P78556 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCL20P78556 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CCL20P78556 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CCL20P78556 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
CCL20P78556 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CCL20P78556 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC13.37□□□□□ -0.27
CCL20P78556 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.37□□□□□ -0.27
CCL20P78556 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCL20P78556 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.37□□□□□ -0.27
CCL20P78556 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CCL20P78556 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
CCL20P78556 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL20P78556 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.36□□□□□ -0.27
CCL20P78556 AC023157.3-201ENST00000619086 2088 ntBASIC13.36□□□□□ -0.27
CCL20P78556 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL20P78556 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.36□□□□□ -0.27
CCL20P78556 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL20P78556 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL20P78556 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL20P78556 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL20P78556 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.36□□□□□ -0.27
CCL20P78556 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.36□□□□□ -0.27
CCL20P78556 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC13.36□□□□□ -0.27
CCL20P78556 MAP2K4P1-201ENST00000438453 1195 ntBASIC13.36□□□□□ -0.27
CCL20P78556 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC13.36□□□□□ -0.27
CCL20P78556 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13.36□□□□□ -0.27
CCL20P78556 RPS15-203ENST00000586096 570 ntTSL 2 BASIC13.36□□□□□ -0.27
CCL20P78556 AL023803.3-201ENST00000615559 522 ntBASIC13.36□□□□□ -0.27
CCL20P78556 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC13.36□□□□□ -0.27
CCL20P78556 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.36□□□□□ -0.27
CCL20P78556 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL20P78556 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CCL20P78556 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL20P78556 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC13.36□□□□□ -0.27
CCL20P78556 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CCL20P78556 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL20P78556 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL20P78556 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL20P78556 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL20P78556 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL20P78556 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCL20P78556 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.36□□□□□ -0.27
CCL20P78556 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.36□□□□□ -0.27
CCL20P78556 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CCL20P78556 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL20P78556 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCL20P78556 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL20P78556 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL20P78556 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL20P78556 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL20P78556 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL20P78556 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL20P78556 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL20P78556 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL20P78556 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL20P78556 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL20P78556 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CCL20P78556 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
CCL20P78556 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL20P78556 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CCL20P78556 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL20P78556 AC104581.4-201ENST00000623126 3052 ntBASIC13.35□□□□□ -0.27
CCL20P78556 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL20P78556 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL20P78556 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL20P78556 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL20P78556 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.35□□□□□ -0.27
CCL20P78556 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
CCL20P78556 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL20P78556 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms