Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CDC42P60953 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC42P60953 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC42P60953 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC42P60953 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CDC42P60953 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC42P60953 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC42P60953 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
CDC42P60953 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC42P60953 ALOX12P2-203ENST00000570921 1945 ntBASIC15.55■□□□□ 0.08
CDC42P60953 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.55■□□□□ 0.08
CDC42P60953 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.55■□□□□ 0.08
CDC42P60953 AC006538.1-201ENST00000567905 1585 ntBASIC15.55■□□□□ 0.08
CDC42P60953 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC42P60953 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CDC42P60953 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC42P60953 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.55■□□□□ 0.08
CDC42P60953 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.55■□□□□ 0.08
CDC42P60953 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.55■□□□□ 0.08
CDC42P60953 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CDC42P60953 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CDC42P60953 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CDC42P60953 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.55■□□□□ 0.08
CDC42P60953 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC42P60953 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CDC42P60953 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC42P60953 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDC42P60953 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC42P60953 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC42P60953 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC42P60953 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.55■□□□□ 0.08
CDC42P60953 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC42P60953 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CDC42P60953 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC42P60953 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CDC42P60953 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC42P60953 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC42P60953 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC42P60953 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDC42P60953 AL049757.1-201ENST00000616842 1596 ntBASIC15.54■□□□□ 0.08
CDC42P60953 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CDC42P60953 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC42P60953 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDC42P60953 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.54■□□□□ 0.08
CDC42P60953 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC42P60953 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDC42P60953 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.54■□□□□ 0.08
CDC42P60953 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDC42P60953 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
CDC42P60953 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC42P60953 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC42P60953 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
CDC42P60953 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC42P60953 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.54■□□□□ 0.08
CDC42P60953 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.54■□□□□ 0.08
CDC42P60953 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.54■□□□□ 0.08
CDC42P60953 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.54■□□□□ 0.08
CDC42P60953 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.54■□□□□ 0.08
CDC42P60953 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDC42P60953 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.54■□□□□ 0.08
CDC42P60953 AL138966.2-201ENST00000621997 464 ntBASIC15.54■□□□□ 0.08
CDC42P60953 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.54■□□□□ 0.08
CDC42P60953 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC42P60953 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC42P60953 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.54■□□□□ 0.08
CDC42P60953 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.54■□□□□ 0.08
CDC42P60953 AC103702.1-201ENST00000548801 2630 ntBASIC15.54■□□□□ 0.08
CDC42P60953 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC42P60953 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.54■□□□□ 0.08
CDC42P60953 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC42P60953 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.54■□□□□ 0.08
CDC42P60953 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.54■□□□□ 0.08
CDC42P60953 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDC42P60953 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDC42P60953 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CDC42P60953 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDC42P60953 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CDC42P60953 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.54■□□□□ 0.08
CDC42P60953 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC42P60953 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDC42P60953 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CDC42P60953 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDC42P60953 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDC42P60953 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDC42P60953 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDC42P60953 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.53■□□□□ 0.08
CDC42P60953 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDC42P60953 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDC42P60953 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDC42P60953 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CDC42P60953 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDC42P60953 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDC42P60953 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDC42P60953 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CDC42P60953 KRT18P22-201ENST00000402024 1347 ntBASIC15.53■□□□□ 0.08
CDC42P60953 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDC42P60953 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.53■□□□□ 0.08
CDC42P60953 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.53■□□□□ 0.08
CDC42P60953 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.53■□□□□ 0.08
CDC42P60953 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms